Protein–RNA interactions for Protein: O35655

Ppef1, Serine/threonine-protein phosphatase with EF-hands 1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppef1O35655 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
Ppef1O35655 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
Ppef1O35655 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC35.19■■■■□ 3.22
Ppef1O35655 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC35.15■■■■□ 3.22
Ppef1O35655 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC35.1■■■■□ 3.21
Ppef1O35655 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC35.1■■■■□ 3.21
Ppef1O35655 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
Ppef1O35655 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Ppef1O35655 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC35.03■■■■□ 3.2
Ppef1O35655 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Ppef1O35655 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
Ppef1O35655 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
Ppef1O35655 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
Ppef1O35655 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Ppef1O35655 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC34.87■■■■□ 3.17
Ppef1O35655 Tdp2-203ENSMUST00000223804 1136 ntBASIC34.87■■■■□ 3.17
Ppef1O35655 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34.87■■■■□ 3.17
Ppef1O35655 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC34.82■■■■□ 3.16
Ppef1O35655 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Ppef1O35655 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC34.74■■■■□ 3.15
Ppef1O35655 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC34.73■■■■□ 3.15
Ppef1O35655 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
Ppef1O35655 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC34.64■■■■□ 3.14
Ppef1O35655 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC34.63■■■■□ 3.13
Ppef1O35655 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
Ppef1O35655 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC34.56■■■■□ 3.12
Ppef1O35655 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC34.52■■■■□ 3.12
Ppef1O35655 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
Ppef1O35655 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.51■■■■□ 3.11
Ppef1O35655 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC34.49■■■■□ 3.11
Ppef1O35655 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
Ppef1O35655 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
Ppef1O35655 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC34.42■■■■□ 3.1
Ppef1O35655 Gm16148-201ENSMUST00000119653 893 ntBASIC34.4■■■■□ 3.1
Ppef1O35655 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Ppef1O35655 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Ppef1O35655 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC34.34■■■■□ 3.09
Ppef1O35655 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC34.32■■■■□ 3.08
Ppef1O35655 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Ppef1O35655 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC34.3■■■■□ 3.08
Ppef1O35655 Gm45855-201ENSMUST00000212546 880 ntBASIC34.25■■■■□ 3.07
Ppef1O35655 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC34.24■■■■□ 3.07
Ppef1O35655 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.23■■■■□ 3.07
Ppef1O35655 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34.23■■■■□ 3.07
Ppef1O35655 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC34.22■■■■□ 3.07
Ppef1O35655 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Ppef1O35655 AC166822.3-201ENSMUST00000227394 661 ntBASIC34.2■■■■□ 3.07
Ppef1O35655 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC34.16■■■■□ 3.06
Ppef1O35655 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC34.14■■■■□ 3.06
Ppef1O35655 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC34.09■■■■□ 3.05
Ppef1O35655 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
Ppef1O35655 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Ppef1O35655 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC34.09■■■■□ 3.05
Ppef1O35655 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
Ppef1O35655 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
Ppef1O35655 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC34.07■■■■□ 3.04
Ppef1O35655 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC34.05■■■■□ 3.04
Ppef1O35655 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC34.02■■■■□ 3.04
Ppef1O35655 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC34.01■■■■□ 3.03
Ppef1O35655 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC33.97■■■■□ 3.03
Ppef1O35655 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC33.94■■■■□ 3.02
Ppef1O35655 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
Ppef1O35655 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Ppef1O35655 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC33.9■■■■□ 3.02
Ppef1O35655 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.89■■■■□ 3.02
Ppef1O35655 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Ppef1O35655 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC33.85■■■■□ 3.01
Ppef1O35655 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Ppef1O35655 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC33.83■■■■□ 3.01
Ppef1O35655 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC33.82■■■■□ 3
Ppef1O35655 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC33.81■■■■□ 3
Ppef1O35655 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC33.8■■■■□ 3
Ppef1O35655 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC33.79■■■■□ 3
Ppef1O35655 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
Ppef1O35655 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
Ppef1O35655 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Ppef1O35655 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC33.72■■■□□ 2.99
Ppef1O35655 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Ppef1O35655 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
Ppef1O35655 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC33.71■■■□□ 2.99
Ppef1O35655 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC33.7■■■□□ 2.99
Ppef1O35655 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
Ppef1O35655 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.69■■■□□ 2.98
Ppef1O35655 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
Ppef1O35655 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.69■■■□□ 2.98
Ppef1O35655 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC33.67■■■□□ 2.98
Ppef1O35655 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
Ppef1O35655 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
Ppef1O35655 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC33.6■■■□□ 2.97
Ppef1O35655 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.58■■■□□ 2.97
Ppef1O35655 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
Ppef1O35655 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC33.56■■■□□ 2.96
Ppef1O35655 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Ppef1O35655 Gm9397-201ENSMUST00000200125 605 ntBASIC33.55■■■□□ 2.96
Ppef1O35655 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
Ppef1O35655 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
Ppef1O35655 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Ppef1O35655 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Ppef1O35655 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC33.34■■■□□ 2.93
Ppef1O35655 Gm8503-201ENSMUST00000118131 455 ntBASIC33.32■■■□□ 2.92
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms