Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC37.26■■■■□ 3.56
Col15a1O35206 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
Col15a1O35206 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC37.2■■■■□ 3.55
Col15a1O35206 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
Col15a1O35206 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC37.17■■■■□ 3.54
Col15a1O35206 Gm10524-201ENSMUST00000181931 1893 ntBASIC37.15■■■■□ 3.54
Col15a1O35206 Gm42596-201ENSMUST00000196305 1958 ntBASIC37.12■■■■□ 3.53
Col15a1O35206 Gm27322-201ENSMUST00000184007 104 ntBASIC37.11■■■■□ 3.53
Col15a1O35206 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
Col15a1O35206 Gm24804-201ENSMUST00000174982 85 ntBASIC37.1■■■■□ 3.53
Col15a1O35206 CT025624.2-201ENSMUST00000223609 1909 ntBASIC37.02■■■■□ 3.52
Col15a1O35206 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Col15a1O35206 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC36.98■■■■□ 3.51
Col15a1O35206 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Col15a1O35206 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC36.96■■■■□ 3.51
Col15a1O35206 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
Col15a1O35206 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC36.88■■■■□ 3.49
Col15a1O35206 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
Col15a1O35206 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Col15a1O35206 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
Col15a1O35206 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC36.67■■■■□ 3.46
Col15a1O35206 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
Col15a1O35206 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC36.56■■■■□ 3.44
Col15a1O35206 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC36.51■■■■□ 3.44
Col15a1O35206 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC36.48■■■■□ 3.43
Col15a1O35206 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
Col15a1O35206 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC36.44■■■■□ 3.42
Col15a1O35206 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC36.41■■■■□ 3.42
Col15a1O35206 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
Col15a1O35206 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
Col15a1O35206 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC36.4■■■■□ 3.42
Col15a1O35206 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC36.39■■■■□ 3.42
Col15a1O35206 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
Col15a1O35206 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC36.33■■■■□ 3.41
Col15a1O35206 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC36.31■■■■□ 3.4
Col15a1O35206 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
Col15a1O35206 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC36.29■■■■□ 3.4
Col15a1O35206 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC36.28■■■■□ 3.4
Col15a1O35206 AC166822.3-201ENSMUST00000227394 661 ntBASIC36.27■■■■□ 3.4
Col15a1O35206 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Col15a1O35206 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC36.26■■■■□ 3.4
Col15a1O35206 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC36.2■■■■□ 3.39
Col15a1O35206 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC36.2■■■■□ 3.39
Col15a1O35206 Zfp131-205ENSMUST00000223812 663 ntBASIC36.2■■■■□ 3.39
Col15a1O35206 AL845457.1-201ENSMUST00000197244 68 ntBASIC36.19■■■■□ 3.38
Col15a1O35206 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
Col15a1O35206 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Col15a1O35206 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Col15a1O35206 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC36.09■■■■□ 3.37
Col15a1O35206 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC36.03■■■■□ 3.36
Col15a1O35206 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC36.02■■■■□ 3.36
Col15a1O35206 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
Col15a1O35206 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC35.96■■■■□ 3.35
Col15a1O35206 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
Col15a1O35206 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Col15a1O35206 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Col15a1O35206 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC35.89■■■■□ 3.34
Col15a1O35206 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Col15a1O35206 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC35.81■■■■□ 3.32
Col15a1O35206 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Col15a1O35206 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC35.79■■■■□ 3.32
Col15a1O35206 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC35.76■■■■□ 3.31
Col15a1O35206 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Col15a1O35206 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
Col15a1O35206 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC35.72■■■■□ 3.31
Col15a1O35206 Zfp131-207ENSMUST00000224946 1783 ntBASIC35.71■■■■□ 3.31
Col15a1O35206 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC35.69■■■■□ 3.3
Col15a1O35206 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
Col15a1O35206 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
Col15a1O35206 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
Col15a1O35206 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC35.61■■■■□ 3.29
Col15a1O35206 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC35.6■■■■□ 3.29
Col15a1O35206 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC35.56■■■■□ 3.28
Col15a1O35206 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
Col15a1O35206 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
Col15a1O35206 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
Col15a1O35206 Gm16148-201ENSMUST00000119653 893 ntBASIC35.5■■■■□ 3.27
Col15a1O35206 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC35.45■■■■□ 3.27
Col15a1O35206 Peli2-204ENSMUST00000226513 1320 ntBASIC35.45■■■■□ 3.27
Col15a1O35206 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
Col15a1O35206 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
Col15a1O35206 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
Col15a1O35206 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC35.38■■■■□ 3.25
Col15a1O35206 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
Col15a1O35206 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
Col15a1O35206 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Col15a1O35206 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC35.32■■■■□ 3.24
Col15a1O35206 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC35.32■■■■□ 3.24
Col15a1O35206 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
Col15a1O35206 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
Col15a1O35206 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
Col15a1O35206 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
Col15a1O35206 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC35.26■■■■□ 3.24
Col15a1O35206 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC35.26■■■■□ 3.24
Col15a1O35206 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC35.26■■■■□ 3.24
Col15a1O35206 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC35.23■■■■□ 3.23
Col15a1O35206 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC35.22■■■■□ 3.23
Col15a1O35206 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
Col15a1O35206 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
Col15a1O35206 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms