Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.41
Gm11236J3QMS7 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.13■■■□□ 2.41
Gm11236J3QMS7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Gm11236J3QMS7 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.05■■■□□ 2.4
Gm11236J3QMS7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Gm11236J3QMS7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Gm11236J3QMS7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Gm11236J3QMS7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Gm11236J3QMS7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Gm11236J3QMS7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.83■■■□□ 2.37
Gm11236J3QMS7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
Gm11236J3QMS7 Gm27322-201ENSMUST00000184007 104 ntBASIC29.82■■■□□ 2.36
Gm11236J3QMS7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Gm11236J3QMS7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
Gm11236J3QMS7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Gm11236J3QMS7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Gm11236J3QMS7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Gm11236J3QMS7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.56■■■□□ 2.32
Gm11236J3QMS7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Gm11236J3QMS7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Gm11236J3QMS7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Gm11236J3QMS7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.53■■■□□ 2.32
Gm11236J3QMS7 Gm24804-201ENSMUST00000174982 85 ntBASIC29.52■■■□□ 2.32
Gm11236J3QMS7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.48■■■□□ 2.31
Gm11236J3QMS7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Gm11236J3QMS7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
Gm11236J3QMS7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Gm11236J3QMS7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.41■■■□□ 2.3
Gm11236J3QMS7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Gm11236J3QMS7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Gm11236J3QMS7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Gm11236J3QMS7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.34■■■□□ 2.29
Gm11236J3QMS7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Gm11236J3QMS7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Gm11236J3QMS7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Gm11236J3QMS7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
Gm11236J3QMS7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
Gm11236J3QMS7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Gm11236J3QMS7 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.21■■■□□ 2.27
Gm11236J3QMS7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.2■■■□□ 2.26
Gm11236J3QMS7 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.19■■■□□ 2.26
Gm11236J3QMS7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Gm11236J3QMS7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Gm11236J3QMS7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Gm11236J3QMS7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Gm11236J3QMS7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Gm11236J3QMS7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Gm11236J3QMS7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Gm11236J3QMS7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Gm11236J3QMS7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Gm11236J3QMS7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Gm11236J3QMS7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Gm11236J3QMS7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29■■■□□ 2.23
Gm11236J3QMS7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Gm11236J3QMS7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Gm11236J3QMS7 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.95■■■□□ 2.22
Gm11236J3QMS7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Gm11236J3QMS7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.92■■■□□ 2.22
Gm11236J3QMS7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Gm11236J3QMS7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Gm11236J3QMS7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
Gm11236J3QMS7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Gm11236J3QMS7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Gm11236J3QMS7 Zfp131-205ENSMUST00000223812 663 ntBASIC28.8■■■□□ 2.2
Gm11236J3QMS7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Gm11236J3QMS7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
Gm11236J3QMS7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.7■■■□□ 2.18
Gm11236J3QMS7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Gm11236J3QMS7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Gm11236J3QMS7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Gm11236J3QMS7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
Gm11236J3QMS7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
Gm11236J3QMS7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Gm11236J3QMS7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
Gm11236J3QMS7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Gm11236J3QMS7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Gm11236J3QMS7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Gm11236J3QMS7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Gm11236J3QMS7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Gm11236J3QMS7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Gm11236J3QMS7 Gm16148-201ENSMUST00000119653 893 ntBASIC28.54■■■□□ 2.16
Gm11236J3QMS7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Gm11236J3QMS7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Gm11236J3QMS7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
Gm11236J3QMS7 Peli2-204ENSMUST00000226513 1320 ntBASIC28.51■■■□□ 2.15
Gm11236J3QMS7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.51■■■□□ 2.15
Gm11236J3QMS7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.51■■■□□ 2.15
Gm11236J3QMS7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Gm11236J3QMS7 Mipep-204ENSMUST00000225043 1548 ntBASIC28.49■■■□□ 2.15
Gm11236J3QMS7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Gm11236J3QMS7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.48■■■□□ 2.15
Gm11236J3QMS7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Gm11236J3QMS7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Gm11236J3QMS7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
Gm11236J3QMS7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
Gm11236J3QMS7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Gm11236J3QMS7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Gm11236J3QMS7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Gm11236J3QMS7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Gm11236J3QMS7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.33■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms