Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
9930021J03RikH3BKP8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
9930021J03RikH3BKP8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.09■■□□□ 1.77
9930021J03RikH3BKP8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.09■■□□□ 1.77
9930021J03RikH3BKP8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
9930021J03RikH3BKP8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
9930021J03RikH3BKP8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.04■■□□□ 1.76
9930021J03RikH3BKP8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
9930021J03RikH3BKP8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
9930021J03RikH3BKP8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.98■■□□□ 1.75
9930021J03RikH3BKP8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
9930021J03RikH3BKP8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
9930021J03RikH3BKP8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
9930021J03RikH3BKP8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
9930021J03RikH3BKP8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
9930021J03RikH3BKP8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
9930021J03RikH3BKP8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
9930021J03RikH3BKP8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
9930021J03RikH3BKP8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.82■■□□□ 1.72
9930021J03RikH3BKP8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.81■■□□□ 1.72
9930021J03RikH3BKP8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.8■■□□□ 1.72
9930021J03RikH3BKP8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
9930021J03RikH3BKP8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
9930021J03RikH3BKP8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
9930021J03RikH3BKP8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
9930021J03RikH3BKP8 Gm26115-201ENSMUST00000175605 87 ntBASIC25.71■■□□□ 1.71
9930021J03RikH3BKP8 Gm8109-201ENSMUST00000194076 746 ntBASIC25.7■■□□□ 1.7
9930021J03RikH3BKP8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
9930021J03RikH3BKP8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
9930021J03RikH3BKP8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.66■■□□□ 1.7
9930021J03RikH3BKP8 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.65■■□□□ 1.7
9930021J03RikH3BKP8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
9930021J03RikH3BKP8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
9930021J03RikH3BKP8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
9930021J03RikH3BKP8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.57■■□□□ 1.68
9930021J03RikH3BKP8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
9930021J03RikH3BKP8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
9930021J03RikH3BKP8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
9930021J03RikH3BKP8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.54■■□□□ 1.68
9930021J03RikH3BKP8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
9930021J03RikH3BKP8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
9930021J03RikH3BKP8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
9930021J03RikH3BKP8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
9930021J03RikH3BKP8 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.46■■□□□ 1.67
9930021J03RikH3BKP8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
9930021J03RikH3BKP8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
9930021J03RikH3BKP8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
9930021J03RikH3BKP8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
9930021J03RikH3BKP8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
9930021J03RikH3BKP8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
9930021J03RikH3BKP8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
9930021J03RikH3BKP8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
9930021J03RikH3BKP8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
9930021J03RikH3BKP8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
9930021J03RikH3BKP8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.32■■□□□ 1.64
9930021J03RikH3BKP8 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.3■■□□□ 1.64
9930021J03RikH3BKP8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
9930021J03RikH3BKP8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
9930021J03RikH3BKP8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
9930021J03RikH3BKP8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
9930021J03RikH3BKP8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
9930021J03RikH3BKP8 Gm27322-201ENSMUST00000184007 104 ntBASIC25.22■■□□□ 1.63
9930021J03RikH3BKP8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
9930021J03RikH3BKP8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
9930021J03RikH3BKP8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
9930021J03RikH3BKP8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
9930021J03RikH3BKP8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
9930021J03RikH3BKP8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
9930021J03RikH3BKP8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.08■■□□□ 1.61
9930021J03RikH3BKP8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
9930021J03RikH3BKP8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
9930021J03RikH3BKP8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
9930021J03RikH3BKP8 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.96■■□□□ 1.59
9930021J03RikH3BKP8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
9930021J03RikH3BKP8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
9930021J03RikH3BKP8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.93■■□□□ 1.58
9930021J03RikH3BKP8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
9930021J03RikH3BKP8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
9930021J03RikH3BKP8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
9930021J03RikH3BKP8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
9930021J03RikH3BKP8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
9930021J03RikH3BKP8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
9930021J03RikH3BKP8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.9■■□□□ 1.58
9930021J03RikH3BKP8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
9930021J03RikH3BKP8 Mipep-204ENSMUST00000225043 1548 ntBASIC24.89■■□□□ 1.57
9930021J03RikH3BKP8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
9930021J03RikH3BKP8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
9930021J03RikH3BKP8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
9930021J03RikH3BKP8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
9930021J03RikH3BKP8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
9930021J03RikH3BKP8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
9930021J03RikH3BKP8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
9930021J03RikH3BKP8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
9930021J03RikH3BKP8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
9930021J03RikH3BKP8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
9930021J03RikH3BKP8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
9930021J03RikH3BKP8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
9930021J03RikH3BKP8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
9930021J03RikH3BKP8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.7■■□□□ 1.55
9930021J03RikH3BKP8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 165.6 ms