Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.14■□□□□ 0.49
C530025M09RikF6RGA8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
C530025M09RikF6RGA8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C530025M09RikF6RGA8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.1■□□□□ 0.49
C530025M09RikF6RGA8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
C530025M09RikF6RGA8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
C530025M09RikF6RGA8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
C530025M09RikF6RGA8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C530025M09RikF6RGA8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
C530025M09RikF6RGA8 Gm25238-201ENSMUST00000174914 89 ntBASIC17.98■□□□□ 0.47
C530025M09RikF6RGA8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C530025M09RikF6RGA8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C530025M09RikF6RGA8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C530025M09RikF6RGA8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
C530025M09RikF6RGA8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC17.93■□□□□ 0.46
C530025M09RikF6RGA8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C530025M09RikF6RGA8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C530025M09RikF6RGA8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.92■□□□□ 0.46
C530025M09RikF6RGA8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C530025M09RikF6RGA8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC17.9■□□□□ 0.46
C530025M09RikF6RGA8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
C530025M09RikF6RGA8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C530025M09RikF6RGA8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
C530025M09RikF6RGA8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C530025M09RikF6RGA8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17.82■□□□□ 0.44
C530025M09RikF6RGA8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
C530025M09RikF6RGA8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C530025M09RikF6RGA8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
C530025M09RikF6RGA8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.78■□□□□ 0.44
C530025M09RikF6RGA8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C530025M09RikF6RGA8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.75■□□□□ 0.43
C530025M09RikF6RGA8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C530025M09RikF6RGA8 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.73■□□□□ 0.43
C530025M09RikF6RGA8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C530025M09RikF6RGA8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C530025M09RikF6RGA8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.66■□□□□ 0.42
C530025M09RikF6RGA8 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.65■□□□□ 0.42
C530025M09RikF6RGA8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C530025M09RikF6RGA8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
C530025M09RikF6RGA8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C530025M09RikF6RGA8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C530025M09RikF6RGA8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
C530025M09RikF6RGA8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C530025M09RikF6RGA8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
C530025M09RikF6RGA8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C530025M09RikF6RGA8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
C530025M09RikF6RGA8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C530025M09RikF6RGA8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC17.6■□□□□ 0.41
C530025M09RikF6RGA8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C530025M09RikF6RGA8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
C530025M09RikF6RGA8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C530025M09RikF6RGA8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C530025M09RikF6RGA8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C530025M09RikF6RGA8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.52■□□□□ 0.4
C530025M09RikF6RGA8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
C530025M09RikF6RGA8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.51■□□□□ 0.39
C530025M09RikF6RGA8 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.51■□□□□ 0.39
C530025M09RikF6RGA8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C530025M09RikF6RGA8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C530025M09RikF6RGA8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
C530025M09RikF6RGA8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC17.47■□□□□ 0.39
C530025M09RikF6RGA8 Rab21-202ENSMUST00000218831 843 ntBASIC17.47■□□□□ 0.39
C530025M09RikF6RGA8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.47■□□□□ 0.39
C530025M09RikF6RGA8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C530025M09RikF6RGA8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
C530025M09RikF6RGA8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C530025M09RikF6RGA8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C530025M09RikF6RGA8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C530025M09RikF6RGA8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
C530025M09RikF6RGA8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.42■□□□□ 0.38
C530025M09RikF6RGA8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C530025M09RikF6RGA8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
C530025M09RikF6RGA8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C530025M09RikF6RGA8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.39■□□□□ 0.37
C530025M09RikF6RGA8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C530025M09RikF6RGA8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
C530025M09RikF6RGA8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C530025M09RikF6RGA8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C530025M09RikF6RGA8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
C530025M09RikF6RGA8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
C530025M09RikF6RGA8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C530025M09RikF6RGA8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
C530025M09RikF6RGA8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
C530025M09RikF6RGA8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC17.33■□□□□ 0.36
C530025M09RikF6RGA8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C530025M09RikF6RGA8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C530025M09RikF6RGA8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
C530025M09RikF6RGA8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.31■□□□□ 0.36
C530025M09RikF6RGA8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C530025M09RikF6RGA8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C530025M09RikF6RGA8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C530025M09RikF6RGA8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC17.28■□□□□ 0.36
C530025M09RikF6RGA8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C530025M09RikF6RGA8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
C530025M09RikF6RGA8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C530025M09RikF6RGA8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C530025M09RikF6RGA8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
C530025M09RikF6RGA8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C530025M09RikF6RGA8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C530025M09RikF6RGA8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 1431.4 ms