Protein–RNA interactions for Protein: E9PVA8

Gcn1, eIF-2-alpha kinase activator GCN1, mousemouse

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcn1E9PVA8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Gcn1E9PVA8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Gcn1E9PVA8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.29■■□□□ 1.64
Gcn1E9PVA8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.26■■□□□ 1.63
Gcn1E9PVA8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Gcn1E9PVA8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Gcn1E9PVA8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.23■■□□□ 1.63
Gcn1E9PVA8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Gcn1E9PVA8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Gcn1E9PVA8 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.16■■□□□ 1.62
Gcn1E9PVA8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Gcn1E9PVA8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.11■■□□□ 1.61
Gcn1E9PVA8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Gcn1E9PVA8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Gcn1E9PVA8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Gcn1E9PVA8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
Gcn1E9PVA8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Gcn1E9PVA8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Gcn1E9PVA8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Gcn1E9PVA8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.9■■□□□ 1.58
Gcn1E9PVA8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.89■■□□□ 1.58
Gcn1E9PVA8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Gcn1E9PVA8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
Gcn1E9PVA8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.87■■□□□ 1.57
Gcn1E9PVA8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Gcn1E9PVA8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.84■■□□□ 1.57
Gcn1E9PVA8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Gcn1E9PVA8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Gcn1E9PVA8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Gcn1E9PVA8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Gcn1E9PVA8 Gm16148-201ENSMUST00000119653 893 ntBASIC24.7■■□□□ 1.55
Gcn1E9PVA8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Gcn1E9PVA8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Gcn1E9PVA8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Gcn1E9PVA8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Gcn1E9PVA8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.68■■□□□ 1.54
Gcn1E9PVA8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Gcn1E9PVA8 Gm45855-201ENSMUST00000212546 880 ntBASIC24.66■■□□□ 1.54
Gcn1E9PVA8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.66■■□□□ 1.54
Gcn1E9PVA8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Gcn1E9PVA8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Gcn1E9PVA8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.64■■□□□ 1.54
Gcn1E9PVA8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.53
Gcn1E9PVA8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Gcn1E9PVA8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Gcn1E9PVA8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Gcn1E9PVA8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Gcn1E9PVA8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Gcn1E9PVA8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Gcn1E9PVA8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Gcn1E9PVA8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Gcn1E9PVA8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Gcn1E9PVA8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Gcn1E9PVA8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.47■■□□□ 1.51
Gcn1E9PVA8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Gcn1E9PVA8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Gcn1E9PVA8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Gcn1E9PVA8 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.42■■□□□ 1.5
Gcn1E9PVA8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Gcn1E9PVA8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
Gcn1E9PVA8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Gcn1E9PVA8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Gcn1E9PVA8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Gcn1E9PVA8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.35■■□□□ 1.49
Gcn1E9PVA8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Gcn1E9PVA8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Gcn1E9PVA8 Gm15039-201ENSMUST00000118914 875 ntBASIC24.31■■□□□ 1.48
Gcn1E9PVA8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Gcn1E9PVA8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Gcn1E9PVA8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Gcn1E9PVA8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Gcn1E9PVA8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Gcn1E9PVA8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Gcn1E9PVA8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.28■■□□□ 1.48
Gcn1E9PVA8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Gcn1E9PVA8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Gcn1E9PVA8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Gcn1E9PVA8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Gcn1E9PVA8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.24■■□□□ 1.47
Gcn1E9PVA8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.24■■□□□ 1.47
Gcn1E9PVA8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.47
Gcn1E9PVA8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Gcn1E9PVA8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Gcn1E9PVA8 Gm8503-201ENSMUST00000118131 455 ntBASIC24.11■■□□□ 1.45
Gcn1E9PVA8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.11■■□□□ 1.45
Gcn1E9PVA8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Gcn1E9PVA8 Gm9397-201ENSMUST00000200125 605 ntBASIC24.11■■□□□ 1.45
Gcn1E9PVA8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Gcn1E9PVA8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Gcn1E9PVA8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.05■■□□□ 1.44
Gcn1E9PVA8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Gcn1E9PVA8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Gcn1E9PVA8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Gcn1E9PVA8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Gcn1E9PVA8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Gcn1E9PVA8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Gcn1E9PVA8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Gcn1E9PVA8 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.93■■□□□ 1.42
Gcn1E9PVA8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Gcn1E9PVA8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms