Protein–RNA interactions for Protein: A0A140T8P7

Igkv8-21, Immunoglobulin kappa variable 8-21 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-21A0A140T8P7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Igkv8-21A0A140T8P7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv8-21A0A140T8P7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv8-21A0A140T8P7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Igkv8-21A0A140T8P7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv8-21A0A140T8P7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Igkv8-21A0A140T8P7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv8-21A0A140T8P7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv8-21A0A140T8P7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.09■□□□□ 0.33
Igkv8-21A0A140T8P7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv8-21A0A140T8P7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv8-21A0A140T8P7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv8-21A0A140T8P7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv8-21A0A140T8P7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Igkv8-21A0A140T8P7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17.06■□□□□ 0.32
Igkv8-21A0A140T8P7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv8-21A0A140T8P7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv8-21A0A140T8P7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igkv8-21A0A140T8P7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv8-21A0A140T8P7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv8-21A0A140T8P7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv8-21A0A140T8P7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv8-21A0A140T8P7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv8-21A0A140T8P7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv8-21A0A140T8P7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv8-21A0A140T8P7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv8-21A0A140T8P7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igkv8-21A0A140T8P7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Igkv8-21A0A140T8P7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
Igkv8-21A0A140T8P7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Igkv8-21A0A140T8P7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Igkv8-21A0A140T8P7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Igkv8-21A0A140T8P7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC16.9■□□□□ 0.3
Igkv8-21A0A140T8P7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Igkv8-21A0A140T8P7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv8-21A0A140T8P7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv8-21A0A140T8P7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv8-21A0A140T8P7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv8-21A0A140T8P7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Igkv8-21A0A140T8P7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv8-21A0A140T8P7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv8-21A0A140T8P7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv8-21A0A140T8P7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC16.79■□□□□ 0.28
Igkv8-21A0A140T8P7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv8-21A0A140T8P7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv8-21A0A140T8P7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv8-21A0A140T8P7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Igkv8-21A0A140T8P7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv8-21A0A140T8P7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv8-21A0A140T8P7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv8-21A0A140T8P7 Gm2415-204ENSMUST00000190235 2004 ntBASIC16.67■□□□□ 0.26
Igkv8-21A0A140T8P7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv8-21A0A140T8P7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv8-21A0A140T8P7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv8-21A0A140T8P7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv8-21A0A140T8P7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Igkv8-21A0A140T8P7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv8-21A0A140T8P7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv8-21A0A140T8P7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv8-21A0A140T8P7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv8-21A0A140T8P7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv8-21A0A140T8P7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv8-21A0A140T8P7 Gm9905-201ENSMUST00000065740 1845 ntBASIC16.61■□□□□ 0.25
Igkv8-21A0A140T8P7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv8-21A0A140T8P7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv8-21A0A140T8P7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv8-21A0A140T8P7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Igkv8-21A0A140T8P7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv8-21A0A140T8P7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Igkv8-21A0A140T8P7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv8-21A0A140T8P7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv8-21A0A140T8P7 Gm6206-201ENSMUST00000133472 2199 ntBASIC16.55■□□□□ 0.24
Igkv8-21A0A140T8P7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv8-21A0A140T8P7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv8-21A0A140T8P7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv8-21A0A140T8P7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Igkv8-21A0A140T8P7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Igkv8-21A0A140T8P7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv8-21A0A140T8P7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv8-21A0A140T8P7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv8-21A0A140T8P7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv8-21A0A140T8P7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Igkv8-21A0A140T8P7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv8-21A0A140T8P7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC16.47■□□□□ 0.23
Igkv8-21A0A140T8P7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv8-21A0A140T8P7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv8-21A0A140T8P7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Igkv8-21A0A140T8P7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv8-21A0A140T8P7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Igkv8-21A0A140T8P7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv8-21A0A140T8P7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv8-21A0A140T8P7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Igkv8-21A0A140T8P7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv8-21A0A140T8P7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv8-21A0A140T8P7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv8-21A0A140T8P7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv8-21A0A140T8P7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv8-21A0A140T8P7 Gm6658-202ENSMUST00000209493 1885 ntBASIC16.4■□□□□ 0.22
Igkv8-21A0A140T8P7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv8-21A0A140T8P7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms