Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Lcmt1A0A0U1RNF2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Lcmt1A0A0U1RNF2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Lcmt1A0A0U1RNF2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
Lcmt1A0A0U1RNF2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Lcmt1A0A0U1RNF2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.4■■■□□ 2.46
Lcmt1A0A0U1RNF2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.39■■■□□ 2.46
Lcmt1A0A0U1RNF2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Lcmt1A0A0U1RNF2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Lcmt1A0A0U1RNF2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.35■■■□□ 2.45
Lcmt1A0A0U1RNF2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
Lcmt1A0A0U1RNF2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Lcmt1A0A0U1RNF2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Lcmt1A0A0U1RNF2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Lcmt1A0A0U1RNF2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Lcmt1A0A0U1RNF2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
Lcmt1A0A0U1RNF2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.07■■■□□ 2.4
Lcmt1A0A0U1RNF2 Gm25262-201ENSMUST00000174934 133 ntBASIC30.05■■■□□ 2.4
Lcmt1A0A0U1RNF2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
Lcmt1A0A0U1RNF2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Lcmt1A0A0U1RNF2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.02■■■□□ 2.4
Lcmt1A0A0U1RNF2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Lcmt1A0A0U1RNF2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Lcmt1A0A0U1RNF2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Lcmt1A0A0U1RNF2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.96■■■□□ 2.39
Lcmt1A0A0U1RNF2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
Lcmt1A0A0U1RNF2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Lcmt1A0A0U1RNF2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
Lcmt1A0A0U1RNF2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Lcmt1A0A0U1RNF2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Lcmt1A0A0U1RNF2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Lcmt1A0A0U1RNF2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Lcmt1A0A0U1RNF2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Lcmt1A0A0U1RNF2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Lcmt1A0A0U1RNF2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.83■■■□□ 2.37
Lcmt1A0A0U1RNF2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Lcmt1A0A0U1RNF2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Lcmt1A0A0U1RNF2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Lcmt1A0A0U1RNF2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Lcmt1A0A0U1RNF2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.77■■■□□ 2.36
Lcmt1A0A0U1RNF2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Lcmt1A0A0U1RNF2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Lcmt1A0A0U1RNF2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Lcmt1A0A0U1RNF2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Lcmt1A0A0U1RNF2 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.74■■■□□ 2.35
Lcmt1A0A0U1RNF2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.72■■■□□ 2.35
Lcmt1A0A0U1RNF2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
Lcmt1A0A0U1RNF2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.64■■■□□ 2.34
Lcmt1A0A0U1RNF2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.57■■■□□ 2.32
Lcmt1A0A0U1RNF2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.56■■■□□ 2.32
Lcmt1A0A0U1RNF2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Lcmt1A0A0U1RNF2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Lcmt1A0A0U1RNF2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
Lcmt1A0A0U1RNF2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Lcmt1A0A0U1RNF2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.49■■■□□ 2.31
Lcmt1A0A0U1RNF2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Lcmt1A0A0U1RNF2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Lcmt1A0A0U1RNF2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Lcmt1A0A0U1RNF2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
Lcmt1A0A0U1RNF2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Lcmt1A0A0U1RNF2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Lcmt1A0A0U1RNF2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Lcmt1A0A0U1RNF2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Lcmt1A0A0U1RNF2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
Lcmt1A0A0U1RNF2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
Lcmt1A0A0U1RNF2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Lcmt1A0A0U1RNF2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Lcmt1A0A0U1RNF2 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.3■■■□□ 2.28
Lcmt1A0A0U1RNF2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.3■■■□□ 2.28
Lcmt1A0A0U1RNF2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
Lcmt1A0A0U1RNF2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Lcmt1A0A0U1RNF2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
Lcmt1A0A0U1RNF2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Lcmt1A0A0U1RNF2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.23■■■□□ 2.27
Lcmt1A0A0U1RNF2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Lcmt1A0A0U1RNF2 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.21■■■□□ 2.27
Lcmt1A0A0U1RNF2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Lcmt1A0A0U1RNF2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.16■■■□□ 2.26
Lcmt1A0A0U1RNF2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Lcmt1A0A0U1RNF2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Lcmt1A0A0U1RNF2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Lcmt1A0A0U1RNF2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
Lcmt1A0A0U1RNF2 Zxda-201ENSMUST00000117281 2621 ntBASIC29.13■■■□□ 2.25
Lcmt1A0A0U1RNF2 Gm27322-201ENSMUST00000184007 104 ntBASIC29.12■■■□□ 2.25
Lcmt1A0A0U1RNF2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
Lcmt1A0A0U1RNF2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Lcmt1A0A0U1RNF2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Lcmt1A0A0U1RNF2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Lcmt1A0A0U1RNF2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.07■■■□□ 2.24
Lcmt1A0A0U1RNF2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
Lcmt1A0A0U1RNF2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Lcmt1A0A0U1RNF2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.05■■■□□ 2.24
Lcmt1A0A0U1RNF2 Gm26115-201ENSMUST00000175605 87 ntBASIC29.05■■■□□ 2.24
Lcmt1A0A0U1RNF2 Mipep-204ENSMUST00000225043 1548 ntBASIC29.01■■■□□ 2.23
Lcmt1A0A0U1RNF2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29■■■□□ 2.23
Lcmt1A0A0U1RNF2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Lcmt1A0A0U1RNF2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.96■■■□□ 2.23
Lcmt1A0A0U1RNF2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Lcmt1A0A0U1RNF2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.95■■■□□ 2.22
Lcmt1A0A0U1RNF2 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.95■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms