Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav9d-4A0A0G2JG37 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav9d-4A0A0G2JG37 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav9d-4A0A0G2JG37 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav9d-4A0A0G2JG37 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav9d-4A0A0G2JG37 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav9d-4A0A0G2JG37 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav9d-4A0A0G2JG37 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trav9d-4A0A0G2JG37 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trav9d-4A0A0G2JG37 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav9d-4A0A0G2JG37 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.41■□□□□ 0.54
Trav9d-4A0A0G2JG37 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trav9d-4A0A0G2JG37 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav9d-4A0A0G2JG37 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav9d-4A0A0G2JG37 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav9d-4A0A0G2JG37 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trav9d-4A0A0G2JG37 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav9d-4A0A0G2JG37 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav9d-4A0A0G2JG37 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.28■□□□□ 0.52
Trav9d-4A0A0G2JG37 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trav9d-4A0A0G2JG37 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav9d-4A0A0G2JG37 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav9d-4A0A0G2JG37 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav9d-4A0A0G2JG37 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav9d-4A0A0G2JG37 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav9d-4A0A0G2JG37 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav9d-4A0A0G2JG37 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.16■□□□□ 0.5
Trav9d-4A0A0G2JG37 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Trav9d-4A0A0G2JG37 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav9d-4A0A0G2JG37 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav9d-4A0A0G2JG37 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav9d-4A0A0G2JG37 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav9d-4A0A0G2JG37 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav9d-4A0A0G2JG37 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav9d-4A0A0G2JG37 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav9d-4A0A0G2JG37 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav9d-4A0A0G2JG37 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.05■□□□□ 0.48
Trav9d-4A0A0G2JG37 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.02■□□□□ 0.47
Trav9d-4A0A0G2JG37 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav9d-4A0A0G2JG37 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav9d-4A0A0G2JG37 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.99■□□□□ 0.47
Trav9d-4A0A0G2JG37 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav9d-4A0A0G2JG37 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav9d-4A0A0G2JG37 Gm27325-201ENSMUST00000175467 74 ntBASIC17.91■□□□□ 0.46
Trav9d-4A0A0G2JG37 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav9d-4A0A0G2JG37 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav9d-4A0A0G2JG37 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav9d-4A0A0G2JG37 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav9d-4A0A0G2JG37 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav9d-4A0A0G2JG37 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Trav9d-4A0A0G2JG37 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav9d-4A0A0G2JG37 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.84■□□□□ 0.45
Trav9d-4A0A0G2JG37 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav9d-4A0A0G2JG37 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav9d-4A0A0G2JG37 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav9d-4A0A0G2JG37 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav9d-4A0A0G2JG37 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav9d-4A0A0G2JG37 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav9d-4A0A0G2JG37 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav9d-4A0A0G2JG37 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav9d-4A0A0G2JG37 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.8■□□□□ 0.44
Trav9d-4A0A0G2JG37 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav9d-4A0A0G2JG37 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav9d-4A0A0G2JG37 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav9d-4A0A0G2JG37 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav9d-4A0A0G2JG37 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trav9d-4A0A0G2JG37 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav9d-4A0A0G2JG37 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav9d-4A0A0G2JG37 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav9d-4A0A0G2JG37 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav9d-4A0A0G2JG37 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav9d-4A0A0G2JG37 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav9d-4A0A0G2JG37 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav9d-4A0A0G2JG37 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17.74■□□□□ 0.43
Trav9d-4A0A0G2JG37 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav9d-4A0A0G2JG37 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav9d-4A0A0G2JG37 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav9d-4A0A0G2JG37 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav9d-4A0A0G2JG37 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav9d-4A0A0G2JG37 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.72■□□□□ 0.43
Trav9d-4A0A0G2JG37 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav9d-4A0A0G2JG37 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav9d-4A0A0G2JG37 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav9d-4A0A0G2JG37 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav9d-4A0A0G2JG37 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Trav9d-4A0A0G2JG37 Gm25238-201ENSMUST00000174914 89 ntBASIC17.67■□□□□ 0.42
Trav9d-4A0A0G2JG37 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav9d-4A0A0G2JG37 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.65■□□□□ 0.42
Trav9d-4A0A0G2JG37 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav9d-4A0A0G2JG37 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC17.64■□□□□ 0.41
Trav9d-4A0A0G2JG37 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav9d-4A0A0G2JG37 Zxda-201ENSMUST00000117281 2621 ntBASIC17.63■□□□□ 0.41
Trav9d-4A0A0G2JG37 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav9d-4A0A0G2JG37 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav9d-4A0A0G2JG37 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav9d-4A0A0G2JG37 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.6■□□□□ 0.41
Trav9d-4A0A0G2JG37 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav9d-4A0A0G2JG37 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav9d-4A0A0G2JG37 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav9d-4A0A0G2JG37 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms