Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trav7-5A0A0G2JFX6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.51■■□□□ 1.03
Trav7-5A0A0G2JFX6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Trav7-5A0A0G2JFX6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.47■■□□□ 1.03
Trav7-5A0A0G2JFX6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trav7-5A0A0G2JFX6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.45■■□□□ 1.02
Trav7-5A0A0G2JFX6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trav7-5A0A0G2JFX6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.45■■□□□ 1.02
Trav7-5A0A0G2JFX6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.41■■□□□ 1.02
Trav7-5A0A0G2JFX6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav7-5A0A0G2JFX6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Trav7-5A0A0G2JFX6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.4■■□□□ 1.02
Trav7-5A0A0G2JFX6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trav7-5A0A0G2JFX6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Trav7-5A0A0G2JFX6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav7-5A0A0G2JFX6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Trav7-5A0A0G2JFX6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Trav7-5A0A0G2JFX6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Trav7-5A0A0G2JFX6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Trav7-5A0A0G2JFX6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trav7-5A0A0G2JFX6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trav7-5A0A0G2JFX6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trav7-5A0A0G2JFX6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trav7-5A0A0G2JFX6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trav7-5A0A0G2JFX6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trav7-5A0A0G2JFX6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.23■□□□□ 0.99
Trav7-5A0A0G2JFX6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.22■□□□□ 0.99
Trav7-5A0A0G2JFX6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trav7-5A0A0G2JFX6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trav7-5A0A0G2JFX6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trav7-5A0A0G2JFX6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trav7-5A0A0G2JFX6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trav7-5A0A0G2JFX6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Trav7-5A0A0G2JFX6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trav7-5A0A0G2JFX6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trav7-5A0A0G2JFX6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trav7-5A0A0G2JFX6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trav7-5A0A0G2JFX6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav7-5A0A0G2JFX6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trav7-5A0A0G2JFX6 Gm26115-201ENSMUST00000175605 87 ntBASIC21.07■□□□□ 0.96
Trav7-5A0A0G2JFX6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav7-5A0A0G2JFX6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav7-5A0A0G2JFX6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trav7-5A0A0G2JFX6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.02■□□□□ 0.96
Trav7-5A0A0G2JFX6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.01■□□□□ 0.95
Trav7-5A0A0G2JFX6 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.01■□□□□ 0.95
Trav7-5A0A0G2JFX6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trav7-5A0A0G2JFX6 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.97■□□□□ 0.95
Trav7-5A0A0G2JFX6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav7-5A0A0G2JFX6 Gm27322-201ENSMUST00000184007 104 ntBASIC20.94■□□□□ 0.94
Trav7-5A0A0G2JFX6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav7-5A0A0G2JFX6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trav7-5A0A0G2JFX6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Trav7-5A0A0G2JFX6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav7-5A0A0G2JFX6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav7-5A0A0G2JFX6 Gm8109-201ENSMUST00000194076 746 ntBASIC20.9■□□□□ 0.94
Trav7-5A0A0G2JFX6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.89■□□□□ 0.94
Trav7-5A0A0G2JFX6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
Trav7-5A0A0G2JFX6 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.86■□□□□ 0.93
Trav7-5A0A0G2JFX6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trav7-5A0A0G2JFX6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trav7-5A0A0G2JFX6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trav7-5A0A0G2JFX6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav7-5A0A0G2JFX6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav7-5A0A0G2JFX6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trav7-5A0A0G2JFX6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav7-5A0A0G2JFX6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav7-5A0A0G2JFX6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trav7-5A0A0G2JFX6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav7-5A0A0G2JFX6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav7-5A0A0G2JFX6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trav7-5A0A0G2JFX6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav7-5A0A0G2JFX6 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.7■□□□□ 0.9
Trav7-5A0A0G2JFX6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav7-5A0A0G2JFX6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.66■□□□□ 0.9
Trav7-5A0A0G2JFX6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trav7-5A0A0G2JFX6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav7-5A0A0G2JFX6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav7-5A0A0G2JFX6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav7-5A0A0G2JFX6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav7-5A0A0G2JFX6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav7-5A0A0G2JFX6 Mipep-204ENSMUST00000225043 1548 ntBASIC20.58■□□□□ 0.88
Trav7-5A0A0G2JFX6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav7-5A0A0G2JFX6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav7-5A0A0G2JFX6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trav7-5A0A0G2JFX6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trav7-5A0A0G2JFX6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trav7-5A0A0G2JFX6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav7-5A0A0G2JFX6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav7-5A0A0G2JFX6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav7-5A0A0G2JFX6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav7-5A0A0G2JFX6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav7-5A0A0G2JFX6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trav7-5A0A0G2JFX6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav7-5A0A0G2JFX6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Trav7-5A0A0G2JFX6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trav7-5A0A0G2JFX6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav7-5A0A0G2JFX6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.4■□□□□ 0.86
Trav7-5A0A0G2JFX6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav7-5A0A0G2JFX6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 170 ms