Protein–RNA interactions for Protein: A0A0B4J1J3

Igkv8-18, Immunoglobulin kappa variable 8-18 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-18A0A0B4J1J3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Igkv8-18A0A0B4J1J3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Igkv8-18A0A0B4J1J3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Igkv8-18A0A0B4J1J3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.98■□□□□ 0.47
Igkv8-18A0A0B4J1J3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Igkv8-18A0A0B4J1J3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Igkv8-18A0A0B4J1J3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Igkv8-18A0A0B4J1J3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Igkv8-18A0A0B4J1J3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Igkv8-18A0A0B4J1J3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv8-18A0A0B4J1J3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv8-18A0A0B4J1J3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.85■□□□□ 0.45
Igkv8-18A0A0B4J1J3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Igkv8-18A0A0B4J1J3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv8-18A0A0B4J1J3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv8-18A0A0B4J1J3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv8-18A0A0B4J1J3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Igkv8-18A0A0B4J1J3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Igkv8-18A0A0B4J1J3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.76■□□□□ 0.43
Igkv8-18A0A0B4J1J3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.72■□□□□ 0.43
Igkv8-18A0A0B4J1J3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv8-18A0A0B4J1J3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv8-18A0A0B4J1J3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC17.68■□□□□ 0.42
Igkv8-18A0A0B4J1J3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv8-18A0A0B4J1J3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv8-18A0A0B4J1J3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv8-18A0A0B4J1J3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv8-18A0A0B4J1J3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv8-18A0A0B4J1J3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv8-18A0A0B4J1J3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv8-18A0A0B4J1J3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv8-18A0A0B4J1J3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Igkv8-18A0A0B4J1J3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Igkv8-18A0A0B4J1J3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv8-18A0A0B4J1J3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC17.59■□□□□ 0.41
Igkv8-18A0A0B4J1J3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igkv8-18A0A0B4J1J3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv8-18A0A0B4J1J3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Igkv8-18A0A0B4J1J3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.56■□□□□ 0.4
Igkv8-18A0A0B4J1J3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv8-18A0A0B4J1J3 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.54■□□□□ 0.4
Igkv8-18A0A0B4J1J3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv8-18A0A0B4J1J3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv8-18A0A0B4J1J3 Gm27325-201ENSMUST00000175467 74 ntBASIC17.45■□□□□ 0.38
Igkv8-18A0A0B4J1J3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Igkv8-18A0A0B4J1J3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv8-18A0A0B4J1J3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv8-18A0A0B4J1J3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv8-18A0A0B4J1J3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv8-18A0A0B4J1J3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv8-18A0A0B4J1J3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv8-18A0A0B4J1J3 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.39■□□□□ 0.37
Igkv8-18A0A0B4J1J3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv8-18A0A0B4J1J3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv8-18A0A0B4J1J3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv8-18A0A0B4J1J3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv8-18A0A0B4J1J3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv8-18A0A0B4J1J3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv8-18A0A0B4J1J3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv8-18A0A0B4J1J3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv8-18A0A0B4J1J3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv8-18A0A0B4J1J3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv8-18A0A0B4J1J3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Igkv8-18A0A0B4J1J3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv8-18A0A0B4J1J3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Igkv8-18A0A0B4J1J3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Igkv8-18A0A0B4J1J3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv8-18A0A0B4J1J3 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.28■□□□□ 0.36
Igkv8-18A0A0B4J1J3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv8-18A0A0B4J1J3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Igkv8-18A0A0B4J1J3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv8-18A0A0B4J1J3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Igkv8-18A0A0B4J1J3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv8-18A0A0B4J1J3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Igkv8-18A0A0B4J1J3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.23■□□□□ 0.35
Igkv8-18A0A0B4J1J3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv8-18A0A0B4J1J3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.21■□□□□ 0.35
Igkv8-18A0A0B4J1J3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv8-18A0A0B4J1J3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv8-18A0A0B4J1J3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv8-18A0A0B4J1J3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv8-18A0A0B4J1J3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv8-18A0A0B4J1J3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv8-18A0A0B4J1J3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv8-18A0A0B4J1J3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv8-18A0A0B4J1J3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Igkv8-18A0A0B4J1J3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv8-18A0A0B4J1J3 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.12■□□□□ 0.33
Igkv8-18A0A0B4J1J3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv8-18A0A0B4J1J3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv8-18A0A0B4J1J3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv8-18A0A0B4J1J3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv8-18A0A0B4J1J3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv8-18A0A0B4J1J3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.1■□□□□ 0.33
Igkv8-18A0A0B4J1J3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv8-18A0A0B4J1J3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv8-18A0A0B4J1J3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv8-18A0A0B4J1J3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv8-18A0A0B4J1J3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Igkv8-18A0A0B4J1J3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms