Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Trbv20A0A0B4J1H5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Trbv20A0A0B4J1H5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Trbv20A0A0B4J1H5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.64■■□□□ 1.54
Trbv20A0A0B4J1H5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Trbv20A0A0B4J1H5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Trbv20A0A0B4J1H5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Trbv20A0A0B4J1H5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trbv20A0A0B4J1H5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trbv20A0A0B4J1H5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trbv20A0A0B4J1H5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trbv20A0A0B4J1H5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trbv20A0A0B4J1H5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trbv20A0A0B4J1H5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.33■■□□□ 1.49
Trbv20A0A0B4J1H5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trbv20A0A0B4J1H5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.31■■□□□ 1.48
Trbv20A0A0B4J1H5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Trbv20A0A0B4J1H5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.27■■□□□ 1.48
Trbv20A0A0B4J1H5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trbv20A0A0B4J1H5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.23■■□□□ 1.47
Trbv20A0A0B4J1H5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Trbv20A0A0B4J1H5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Trbv20A0A0B4J1H5 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.2■■□□□ 1.46
Trbv20A0A0B4J1H5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Trbv20A0A0B4J1H5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
Trbv20A0A0B4J1H5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trbv20A0A0B4J1H5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.08■■□□□ 1.45
Trbv20A0A0B4J1H5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Trbv20A0A0B4J1H5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Trbv20A0A0B4J1H5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trbv20A0A0B4J1H5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Trbv20A0A0B4J1H5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trbv20A0A0B4J1H5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trbv20A0A0B4J1H5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trbv20A0A0B4J1H5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trbv20A0A0B4J1H5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trbv20A0A0B4J1H5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trbv20A0A0B4J1H5 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.96■■□□□ 1.43
Trbv20A0A0B4J1H5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Trbv20A0A0B4J1H5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Trbv20A0A0B4J1H5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Trbv20A0A0B4J1H5 Gm27325-201ENSMUST00000175467 74 ntBASIC23.93■■□□□ 1.42
Trbv20A0A0B4J1H5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trbv20A0A0B4J1H5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Trbv20A0A0B4J1H5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Trbv20A0A0B4J1H5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Trbv20A0A0B4J1H5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trbv20A0A0B4J1H5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Trbv20A0A0B4J1H5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trbv20A0A0B4J1H5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trbv20A0A0B4J1H5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.8■■□□□ 1.4
Trbv20A0A0B4J1H5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trbv20A0A0B4J1H5 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.79■■□□□ 1.4
Trbv20A0A0B4J1H5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trbv20A0A0B4J1H5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Trbv20A0A0B4J1H5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trbv20A0A0B4J1H5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trbv20A0A0B4J1H5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trbv20A0A0B4J1H5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trbv20A0A0B4J1H5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trbv20A0A0B4J1H5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Trbv20A0A0B4J1H5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.66■■□□□ 1.38
Trbv20A0A0B4J1H5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trbv20A0A0B4J1H5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trbv20A0A0B4J1H5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.65■■□□□ 1.38
Trbv20A0A0B4J1H5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trbv20A0A0B4J1H5 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.65■■□□□ 1.38
Trbv20A0A0B4J1H5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trbv20A0A0B4J1H5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trbv20A0A0B4J1H5 Zxda-201ENSMUST00000117281 2621 ntBASIC23.63■■□□□ 1.37
Trbv20A0A0B4J1H5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trbv20A0A0B4J1H5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trbv20A0A0B4J1H5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trbv20A0A0B4J1H5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trbv20A0A0B4J1H5 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.59■■□□□ 1.37
Trbv20A0A0B4J1H5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trbv20A0A0B4J1H5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Trbv20A0A0B4J1H5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trbv20A0A0B4J1H5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Trbv20A0A0B4J1H5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trbv20A0A0B4J1H5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.56■■□□□ 1.36
Trbv20A0A0B4J1H5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trbv20A0A0B4J1H5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Trbv20A0A0B4J1H5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Trbv20A0A0B4J1H5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.47■■□□□ 1.35
Trbv20A0A0B4J1H5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trbv20A0A0B4J1H5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Trbv20A0A0B4J1H5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.45■■□□□ 1.34
Trbv20A0A0B4J1H5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trbv20A0A0B4J1H5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trbv20A0A0B4J1H5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trbv20A0A0B4J1H5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trbv20A0A0B4J1H5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Trbv20A0A0B4J1H5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trbv20A0A0B4J1H5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trbv20A0A0B4J1H5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Trbv20A0A0B4J1H5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Trbv20A0A0B4J1H5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trbv20A0A0B4J1H5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trbv20A0A0B4J1H5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.32■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms