Protein–RNA interactions for Protein: A0A0A6YWU3

Ighv6-7, Immunoglobulin heavy variable V6-7 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-7A0A0A6YWU3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ighv6-7A0A0A6YWU3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ighv6-7A0A0A6YWU3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.23■□□□□ 0.83
Ighv6-7A0A0A6YWU3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ighv6-7A0A0A6YWU3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ighv6-7A0A0A6YWU3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.21■□□□□ 0.83
Ighv6-7A0A0A6YWU3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ighv6-7A0A0A6YWU3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ighv6-7A0A0A6YWU3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ighv6-7A0A0A6YWU3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.12■□□□□ 0.81
Ighv6-7A0A0A6YWU3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv6-7A0A0A6YWU3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.1■□□□□ 0.81
Ighv6-7A0A0A6YWU3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ighv6-7A0A0A6YWU3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ighv6-7A0A0A6YWU3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ighv6-7A0A0A6YWU3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.02■□□□□ 0.8
Ighv6-7A0A0A6YWU3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv6-7A0A0A6YWU3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv6-7A0A0A6YWU3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ighv6-7A0A0A6YWU3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.99■□□□□ 0.79
Ighv6-7A0A0A6YWU3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.97■□□□□ 0.79
Ighv6-7A0A0A6YWU3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv6-7A0A0A6YWU3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.95■□□□□ 0.78
Ighv6-7A0A0A6YWU3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ighv6-7A0A0A6YWU3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.92■□□□□ 0.78
Ighv6-7A0A0A6YWU3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ighv6-7A0A0A6YWU3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ighv6-7A0A0A6YWU3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ighv6-7A0A0A6YWU3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ighv6-7A0A0A6YWU3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ighv6-7A0A0A6YWU3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ighv6-7A0A0A6YWU3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ighv6-7A0A0A6YWU3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv6-7A0A0A6YWU3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ighv6-7A0A0A6YWU3 Gm26115-201ENSMUST00000175605 87 ntBASIC19.87■□□□□ 0.77
Ighv6-7A0A0A6YWU3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv6-7A0A0A6YWU3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv6-7A0A0A6YWU3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ighv6-7A0A0A6YWU3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.83■□□□□ 0.77
Ighv6-7A0A0A6YWU3 Zxda-201ENSMUST00000117281 2621 ntBASIC19.82■□□□□ 0.76
Ighv6-7A0A0A6YWU3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ighv6-7A0A0A6YWU3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ighv6-7A0A0A6YWU3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv6-7A0A0A6YWU3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.8■□□□□ 0.76
Ighv6-7A0A0A6YWU3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv6-7A0A0A6YWU3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ighv6-7A0A0A6YWU3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv6-7A0A0A6YWU3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv6-7A0A0A6YWU3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv6-7A0A0A6YWU3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv6-7A0A0A6YWU3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv6-7A0A0A6YWU3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv6-7A0A0A6YWU3 Gm8109-201ENSMUST00000194076 746 ntBASIC19.7■□□□□ 0.74
Ighv6-7A0A0A6YWU3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv6-7A0A0A6YWU3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv6-7A0A0A6YWU3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv6-7A0A0A6YWU3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ighv6-7A0A0A6YWU3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv6-7A0A0A6YWU3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv6-7A0A0A6YWU3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv6-7A0A0A6YWU3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv6-7A0A0A6YWU3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv6-7A0A0A6YWU3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ighv6-7A0A0A6YWU3 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.58■□□□□ 0.72
Ighv6-7A0A0A6YWU3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ighv6-7A0A0A6YWU3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.58■□□□□ 0.72
Ighv6-7A0A0A6YWU3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv6-7A0A0A6YWU3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Ighv6-7A0A0A6YWU3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.55■□□□□ 0.72
Ighv6-7A0A0A6YWU3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
Ighv6-7A0A0A6YWU3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv6-7A0A0A6YWU3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv6-7A0A0A6YWU3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ighv6-7A0A0A6YWU3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.53■□□□□ 0.72
Ighv6-7A0A0A6YWU3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Ighv6-7A0A0A6YWU3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ighv6-7A0A0A6YWU3 Gm27322-201ENSMUST00000184007 104 ntBASIC19.51■□□□□ 0.71
Ighv6-7A0A0A6YWU3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ighv6-7A0A0A6YWU3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv6-7A0A0A6YWU3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ighv6-7A0A0A6YWU3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv6-7A0A0A6YWU3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ighv6-7A0A0A6YWU3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ighv6-7A0A0A6YWU3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ighv6-7A0A0A6YWU3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ighv6-7A0A0A6YWU3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.37■□□□□ 0.69
Ighv6-7A0A0A6YWU3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv6-7A0A0A6YWU3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.35■□□□□ 0.69
Ighv6-7A0A0A6YWU3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Ighv6-7A0A0A6YWU3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ighv6-7A0A0A6YWU3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv6-7A0A0A6YWU3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv6-7A0A0A6YWU3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv6-7A0A0A6YWU3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv6-7A0A0A6YWU3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv6-7A0A0A6YWU3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv6-7A0A0A6YWU3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv6-7A0A0A6YWU3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv6-7A0A0A6YWU3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv6-7A0A0A6YWU3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms