Protein–RNA interactions for Protein: A0A0A6YWG2

Ighv1-5, Immunoglobulin heavy variable V1-5 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-5A0A0A6YWG2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ighv1-5A0A0A6YWG2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.11■□□□□ 0.81
Ighv1-5A0A0A6YWG2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.11■□□□□ 0.81
Ighv1-5A0A0A6YWG2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.08■□□□□ 0.81
Ighv1-5A0A0A6YWG2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ighv1-5A0A0A6YWG2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.02■□□□□ 0.8
Ighv1-5A0A0A6YWG2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-5A0A0A6YWG2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.01■□□□□ 0.79
Ighv1-5A0A0A6YWG2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-5A0A0A6YWG2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-5A0A0A6YWG2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Ighv1-5A0A0A6YWG2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-5A0A0A6YWG2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ighv1-5A0A0A6YWG2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ighv1-5A0A0A6YWG2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ighv1-5A0A0A6YWG2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.94■□□□□ 0.78
Ighv1-5A0A0A6YWG2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ighv1-5A0A0A6YWG2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ighv1-5A0A0A6YWG2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ighv1-5A0A0A6YWG2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ighv1-5A0A0A6YWG2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ighv1-5A0A0A6YWG2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ighv1-5A0A0A6YWG2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ighv1-5A0A0A6YWG2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.87■□□□□ 0.77
Ighv1-5A0A0A6YWG2 Gm26115-201ENSMUST00000175605 87 ntBASIC19.86■□□□□ 0.77
Ighv1-5A0A0A6YWG2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-5A0A0A6YWG2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.83■□□□□ 0.77
Ighv1-5A0A0A6YWG2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ighv1-5A0A0A6YWG2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ighv1-5A0A0A6YWG2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ighv1-5A0A0A6YWG2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ighv1-5A0A0A6YWG2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ighv1-5A0A0A6YWG2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-5A0A0A6YWG2 Gm8109-201ENSMUST00000194076 746 ntBASIC19.73■□□□□ 0.75
Ighv1-5A0A0A6YWG2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-5A0A0A6YWG2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-5A0A0A6YWG2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ighv1-5A0A0A6YWG2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-5A0A0A6YWG2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-5A0A0A6YWG2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ighv1-5A0A0A6YWG2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ighv1-5A0A0A6YWG2 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.65■□□□□ 0.74
Ighv1-5A0A0A6YWG2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ighv1-5A0A0A6YWG2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.65■□□□□ 0.74
Ighv1-5A0A0A6YWG2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.6■□□□□ 0.73
Ighv1-5A0A0A6YWG2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-5A0A0A6YWG2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Ighv1-5A0A0A6YWG2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ighv1-5A0A0A6YWG2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ighv1-5A0A0A6YWG2 Gm27322-201ENSMUST00000184007 104 ntBASIC19.57■□□□□ 0.72
Ighv1-5A0A0A6YWG2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-5A0A0A6YWG2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv1-5A0A0A6YWG2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
Ighv1-5A0A0A6YWG2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv1-5A0A0A6YWG2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ighv1-5A0A0A6YWG2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-5A0A0A6YWG2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ighv1-5A0A0A6YWG2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv1-5A0A0A6YWG2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv1-5A0A0A6YWG2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.45■□□□□ 0.7
Ighv1-5A0A0A6YWG2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-5A0A0A6YWG2 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.41■□□□□ 0.7
Ighv1-5A0A0A6YWG2 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.4■□□□□ 0.7
Ighv1-5A0A0A6YWG2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ighv1-5A0A0A6YWG2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ighv1-5A0A0A6YWG2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ighv1-5A0A0A6YWG2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv1-5A0A0A6YWG2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv1-5A0A0A6YWG2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-5A0A0A6YWG2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-5A0A0A6YWG2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.34■□□□□ 0.69
Ighv1-5A0A0A6YWG2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-5A0A0A6YWG2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ighv1-5A0A0A6YWG2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-5A0A0A6YWG2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv1-5A0A0A6YWG2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-5A0A0A6YWG2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-5A0A0A6YWG2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-5A0A0A6YWG2 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.28■□□□□ 0.68
Ighv1-5A0A0A6YWG2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ighv1-5A0A0A6YWG2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-5A0A0A6YWG2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.24■□□□□ 0.67
Ighv1-5A0A0A6YWG2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ighv1-5A0A0A6YWG2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-5A0A0A6YWG2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-5A0A0A6YWG2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-5A0A0A6YWG2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-5A0A0A6YWG2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-5A0A0A6YWG2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.17■□□□□ 0.66
Ighv1-5A0A0A6YWG2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.17■□□□□ 0.66
Ighv1-5A0A0A6YWG2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-5A0A0A6YWG2 Gm24804-201ENSMUST00000174982 85 ntBASIC19.14■□□□□ 0.65
Ighv1-5A0A0A6YWG2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-5A0A0A6YWG2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.13■□□□□ 0.65
Ighv1-5A0A0A6YWG2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ighv1-5A0A0A6YWG2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-5A0A0A6YWG2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-5A0A0A6YWG2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-5A0A0A6YWG2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv1-5A0A0A6YWG2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms