Protein–RNA interactions for Protein: A0A0A6YW39

Ighv16-1, Immunoglobulin heavy variable 16-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv16-1A0A0A6YW39 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Ighv16-1A0A0A6YW39 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ighv16-1A0A0A6YW39 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ighv16-1A0A0A6YW39 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.65■■□□□ 1.7
Ighv16-1A0A0A6YW39 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Ighv16-1A0A0A6YW39 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ighv16-1A0A0A6YW39 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ighv16-1A0A0A6YW39 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ighv16-1A0A0A6YW39 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Ighv16-1A0A0A6YW39 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.58■■□□□ 1.69
Ighv16-1A0A0A6YW39 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ighv16-1A0A0A6YW39 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.56■■□□□ 1.68
Ighv16-1A0A0A6YW39 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
Ighv16-1A0A0A6YW39 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ighv16-1A0A0A6YW39 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Ighv16-1A0A0A6YW39 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Ighv16-1A0A0A6YW39 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.43■■□□□ 1.66
Ighv16-1A0A0A6YW39 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ighv16-1A0A0A6YW39 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
Ighv16-1A0A0A6YW39 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.38■■□□□ 1.65
Ighv16-1A0A0A6YW39 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ighv16-1A0A0A6YW39 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ighv16-1A0A0A6YW39 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ighv16-1A0A0A6YW39 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.3■■□□□ 1.64
Ighv16-1A0A0A6YW39 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ighv16-1A0A0A6YW39 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ighv16-1A0A0A6YW39 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ighv16-1A0A0A6YW39 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ighv16-1A0A0A6YW39 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ighv16-1A0A0A6YW39 Gm26115-201ENSMUST00000175605 87 ntBASIC25.18■■□□□ 1.62
Ighv16-1A0A0A6YW39 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.15■■□□□ 1.62
Ighv16-1A0A0A6YW39 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Ighv16-1A0A0A6YW39 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Ighv16-1A0A0A6YW39 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Ighv16-1A0A0A6YW39 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ighv16-1A0A0A6YW39 Gm8109-201ENSMUST00000194076 746 ntBASIC25.09■■□□□ 1.61
Ighv16-1A0A0A6YW39 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.08■■□□□ 1.6
Ighv16-1A0A0A6YW39 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Ighv16-1A0A0A6YW39 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.05■■□□□ 1.6
Ighv16-1A0A0A6YW39 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.04■■□□□ 1.6
Ighv16-1A0A0A6YW39 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ighv16-1A0A0A6YW39 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ighv16-1A0A0A6YW39 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ighv16-1A0A0A6YW39 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ighv16-1A0A0A6YW39 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
Ighv16-1A0A0A6YW39 Gm27322-201ENSMUST00000184007 104 ntBASIC24.96■■□□□ 1.59
Ighv16-1A0A0A6YW39 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Ighv16-1A0A0A6YW39 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ighv16-1A0A0A6YW39 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Ighv16-1A0A0A6YW39 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Ighv16-1A0A0A6YW39 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Ighv16-1A0A0A6YW39 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.9■■□□□ 1.58
Ighv16-1A0A0A6YW39 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ighv16-1A0A0A6YW39 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ighv16-1A0A0A6YW39 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ighv16-1A0A0A6YW39 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ighv16-1A0A0A6YW39 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Ighv16-1A0A0A6YW39 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ighv16-1A0A0A6YW39 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.87■■□□□ 1.57
Ighv16-1A0A0A6YW39 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ighv16-1A0A0A6YW39 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ighv16-1A0A0A6YW39 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.83■■□□□ 1.57
Ighv16-1A0A0A6YW39 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ighv16-1A0A0A6YW39 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ighv16-1A0A0A6YW39 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ighv16-1A0A0A6YW39 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Ighv16-1A0A0A6YW39 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Ighv16-1A0A0A6YW39 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.63■■□□□ 1.53
Ighv16-1A0A0A6YW39 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ighv16-1A0A0A6YW39 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.62■■□□□ 1.53
Ighv16-1A0A0A6YW39 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ighv16-1A0A0A6YW39 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Ighv16-1A0A0A6YW39 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
Ighv16-1A0A0A6YW39 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ighv16-1A0A0A6YW39 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ighv16-1A0A0A6YW39 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ighv16-1A0A0A6YW39 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ighv16-1A0A0A6YW39 Mipep-204ENSMUST00000225043 1548 ntBASIC24.53■■□□□ 1.52
Ighv16-1A0A0A6YW39 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ighv16-1A0A0A6YW39 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ighv16-1A0A0A6YW39 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Ighv16-1A0A0A6YW39 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ighv16-1A0A0A6YW39 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ighv16-1A0A0A6YW39 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ighv16-1A0A0A6YW39 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ighv16-1A0A0A6YW39 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ighv16-1A0A0A6YW39 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.41■■□□□ 1.5
Ighv16-1A0A0A6YW39 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ighv16-1A0A0A6YW39 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ighv16-1A0A0A6YW39 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ighv16-1A0A0A6YW39 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ighv16-1A0A0A6YW39 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ighv16-1A0A0A6YW39 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Ighv16-1A0A0A6YW39 Gm24804-201ENSMUST00000174982 85 ntBASIC24.32■■□□□ 1.48
Ighv16-1A0A0A6YW39 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ighv16-1A0A0A6YW39 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Ighv16-1A0A0A6YW39 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Ighv16-1A0A0A6YW39 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.3■■□□□ 1.48
Ighv16-1A0A0A6YW39 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ighv16-1A0A0A6YW39 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms