Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Gm25262-201ENSMUST00000174934 133 ntBASIC23.62■■□□□ 1.37
Trav6n-7A0A075B6A6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trav6n-7A0A075B6A6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.58■■□□□ 1.37
Trav6n-7A0A075B6A6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Trav6n-7A0A075B6A6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trav6n-7A0A075B6A6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trav6n-7A0A075B6A6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.52■■□□□ 1.36
Trav6n-7A0A075B6A6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Trav6n-7A0A075B6A6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Trav6n-7A0A075B6A6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Trav6n-7A0A075B6A6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trav6n-7A0A075B6A6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.44■■□□□ 1.34
Trav6n-7A0A075B6A6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trav6n-7A0A075B6A6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.41■■□□□ 1.34
Trav6n-7A0A075B6A6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trav6n-7A0A075B6A6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trav6n-7A0A075B6A6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trav6n-7A0A075B6A6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Trav6n-7A0A075B6A6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Trav6n-7A0A075B6A6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trav6n-7A0A075B6A6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trav6n-7A0A075B6A6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trav6n-7A0A075B6A6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trav6n-7A0A075B6A6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trav6n-7A0A075B6A6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.18■■□□□ 1.3
Trav6n-7A0A075B6A6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trav6n-7A0A075B6A6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trav6n-7A0A075B6A6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Trav6n-7A0A075B6A6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trav6n-7A0A075B6A6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.11■■□□□ 1.29
Trav6n-7A0A075B6A6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.1■■□□□ 1.29
Trav6n-7A0A075B6A6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.08■■□□□ 1.29
Trav6n-7A0A075B6A6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Trav6n-7A0A075B6A6 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.06■■□□□ 1.28
Trav6n-7A0A075B6A6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Trav6n-7A0A075B6A6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trav6n-7A0A075B6A6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trav6n-7A0A075B6A6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23■■□□□ 1.27
Trav6n-7A0A075B6A6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trav6n-7A0A075B6A6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trav6n-7A0A075B6A6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trav6n-7A0A075B6A6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trav6n-7A0A075B6A6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trav6n-7A0A075B6A6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trav6n-7A0A075B6A6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trav6n-7A0A075B6A6 Gm26115-201ENSMUST00000175605 87 ntBASIC22.9■■□□□ 1.26
Trav6n-7A0A075B6A6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trav6n-7A0A075B6A6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Trav6n-7A0A075B6A6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trav6n-7A0A075B6A6 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.87■■□□□ 1.25
Trav6n-7A0A075B6A6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Trav6n-7A0A075B6A6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Trav6n-7A0A075B6A6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Trav6n-7A0A075B6A6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Trav6n-7A0A075B6A6 Gm8109-201ENSMUST00000194076 746 ntBASIC22.83■■□□□ 1.25
Trav6n-7A0A075B6A6 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.83■■□□□ 1.25
Trav6n-7A0A075B6A6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Trav6n-7A0A075B6A6 Gm27322-201ENSMUST00000184007 104 ntBASIC22.81■■□□□ 1.24
Trav6n-7A0A075B6A6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
Trav6n-7A0A075B6A6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Trav6n-7A0A075B6A6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trav6n-7A0A075B6A6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trav6n-7A0A075B6A6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trav6n-7A0A075B6A6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.74■■□□□ 1.23
Trav6n-7A0A075B6A6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.74■■□□□ 1.23
Trav6n-7A0A075B6A6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trav6n-7A0A075B6A6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Trav6n-7A0A075B6A6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Trav6n-7A0A075B6A6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trav6n-7A0A075B6A6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Trav6n-7A0A075B6A6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trav6n-7A0A075B6A6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trav6n-7A0A075B6A6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Trav6n-7A0A075B6A6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trav6n-7A0A075B6A6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Trav6n-7A0A075B6A6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Trav6n-7A0A075B6A6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.57■■□□□ 1.2
Trav6n-7A0A075B6A6 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.55■■□□□ 1.2
Trav6n-7A0A075B6A6 Mipep-204ENSMUST00000225043 1548 ntBASIC22.54■■□□□ 1.2
Trav6n-7A0A075B6A6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Trav6n-7A0A075B6A6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Trav6n-7A0A075B6A6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trav6n-7A0A075B6A6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trav6n-7A0A075B6A6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Trav6n-7A0A075B6A6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trav6n-7A0A075B6A6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trav6n-7A0A075B6A6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trav6n-7A0A075B6A6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trav6n-7A0A075B6A6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trav6n-7A0A075B6A6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trav6n-7A0A075B6A6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trav6n-7A0A075B6A6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trav6n-7A0A075B6A6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trav6n-7A0A075B6A6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trav6n-7A0A075B6A6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.34■■□□□ 1.17
Trav6n-7A0A075B6A6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trav6n-7A0A075B6A6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trav6n-7A0A075B6A6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trav6n-7A0A075B6A6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trav6n-7A0A075B6A6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms