Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.3■■□□□ 1
Trav6n-5A0A075B621 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trav6n-5A0A075B621 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Trav6n-5A0A075B621 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav6n-5A0A075B621 Gm23366-201ENSMUST00000175022 89 ntBASIC21.26■□□□□ 0.99
Trav6n-5A0A075B621 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trav6n-5A0A075B621 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.19■□□□□ 0.98
Trav6n-5A0A075B621 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trav6n-5A0A075B621 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trav6n-5A0A075B621 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trav6n-5A0A075B621 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trav6n-5A0A075B621 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav6n-5A0A075B621 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav6n-5A0A075B621 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trav6n-5A0A075B621 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav6n-5A0A075B621 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav6n-5A0A075B621 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.03■□□□□ 0.96
Trav6n-5A0A075B621 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Trav6n-5A0A075B621 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Trav6n-5A0A075B621 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav6n-5A0A075B621 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.93■□□□□ 0.94
Trav6n-5A0A075B621 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav6n-5A0A075B621 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav6n-5A0A075B621 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.88■□□□□ 0.93
Trav6n-5A0A075B621 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.88■□□□□ 0.93
Trav6n-5A0A075B621 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trav6n-5A0A075B621 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav6n-5A0A075B621 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trav6n-5A0A075B621 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trav6n-5A0A075B621 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.81■□□□□ 0.92
Trav6n-5A0A075B621 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav6n-5A0A075B621 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trav6n-5A0A075B621 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav6n-5A0A075B621 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav6n-5A0A075B621 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav6n-5A0A075B621 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.73■□□□□ 0.91
Trav6n-5A0A075B621 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav6n-5A0A075B621 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav6n-5A0A075B621 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav6n-5A0A075B621 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav6n-5A0A075B621 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trav6n-5A0A075B621 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav6n-5A0A075B621 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trav6n-5A0A075B621 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trav6n-5A0A075B621 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav6n-5A0A075B621 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.61■□□□□ 0.89
Trav6n-5A0A075B621 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav6n-5A0A075B621 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav6n-5A0A075B621 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav6n-5A0A075B621 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.57■□□□□ 0.88
Trav6n-5A0A075B621 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav6n-5A0A075B621 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav6n-5A0A075B621 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav6n-5A0A075B621 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav6n-5A0A075B621 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav6n-5A0A075B621 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav6n-5A0A075B621 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Trav6n-5A0A075B621 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trav6n-5A0A075B621 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav6n-5A0A075B621 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trav6n-5A0A075B621 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav6n-5A0A075B621 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav6n-5A0A075B621 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav6n-5A0A075B621 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.44■□□□□ 0.86
Trav6n-5A0A075B621 Zxda-201ENSMUST00000117281 2621 ntBASIC20.43■□□□□ 0.86
Trav6n-5A0A075B621 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav6n-5A0A075B621 Gm27325-201ENSMUST00000175467 74 ntBASIC20.42■□□□□ 0.86
Trav6n-5A0A075B621 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav6n-5A0A075B621 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav6n-5A0A075B621 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav6n-5A0A075B621 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.39■□□□□ 0.85
Trav6n-5A0A075B621 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trav6n-5A0A075B621 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6n-5A0A075B621 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6n-5A0A075B621 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6n-5A0A075B621 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav6n-5A0A075B621 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav6n-5A0A075B621 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.34■□□□□ 0.85
Trav6n-5A0A075B621 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav6n-5A0A075B621 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trav6n-5A0A075B621 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav6n-5A0A075B621 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6n-5A0A075B621 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.3■□□□□ 0.84
Trav6n-5A0A075B621 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav6n-5A0A075B621 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trav6n-5A0A075B621 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trav6n-5A0A075B621 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trav6n-5A0A075B621 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav6n-5A0A075B621 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav6n-5A0A075B621 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trav6n-5A0A075B621 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav6n-5A0A075B621 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trav6n-5A0A075B621 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.23■□□□□ 0.83
Trav6n-5A0A075B621 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav6n-5A0A075B621 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav6n-5A0A075B621 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav6n-5A0A075B621 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav6n-5A0A075B621 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav6n-5A0A075B621 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.19■□□□□ 0.82
Trav6n-5A0A075B621 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms