Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Trav7n-5A0A075B604 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.84■■□□□ 1.25
Trav7n-5A0A075B604 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.82■■□□□ 1.24
Trav7n-5A0A075B604 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trav7n-5A0A075B604 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trav7n-5A0A075B604 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Trav7n-5A0A075B604 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.77■■□□□ 1.24
Trav7n-5A0A075B604 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Trav7n-5A0A075B604 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Trav7n-5A0A075B604 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.75■■□□□ 1.23
Trav7n-5A0A075B604 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.72■■□□□ 1.23
Trav7n-5A0A075B604 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
Trav7n-5A0A075B604 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trav7n-5A0A075B604 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Trav7n-5A0A075B604 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trav7n-5A0A075B604 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trav7n-5A0A075B604 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trav7n-5A0A075B604 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trav7n-5A0A075B604 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.58■■□□□ 1.21
Trav7n-5A0A075B604 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trav7n-5A0A075B604 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.57■■□□□ 1.2
Trav7n-5A0A075B604 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trav7n-5A0A075B604 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Trav7n-5A0A075B604 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trav7n-5A0A075B604 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trav7n-5A0A075B604 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trav7n-5A0A075B604 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trav7n-5A0A075B604 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trav7n-5A0A075B604 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trav7n-5A0A075B604 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trav7n-5A0A075B604 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trav7n-5A0A075B604 Gm26115-201ENSMUST00000175605 87 ntBASIC22.41■■□□□ 1.18
Trav7n-5A0A075B604 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trav7n-5A0A075B604 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trav7n-5A0A075B604 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.36■■□□□ 1.17
Trav7n-5A0A075B604 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.35■■□□□ 1.17
Trav7n-5A0A075B604 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.35■■□□□ 1.17
Trav7n-5A0A075B604 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trav7n-5A0A075B604 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Trav7n-5A0A075B604 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.32■■□□□ 1.16
Trav7n-5A0A075B604 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trav7n-5A0A075B604 Gm8109-201ENSMUST00000194076 746 ntBASIC22.26■■□□□ 1.15
Trav7n-5A0A075B604 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trav7n-5A0A075B604 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Trav7n-5A0A075B604 Gm27322-201ENSMUST00000184007 104 ntBASIC22.25■■□□□ 1.15
Trav7n-5A0A075B604 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Trav7n-5A0A075B604 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trav7n-5A0A075B604 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.19■■□□□ 1.14
Trav7n-5A0A075B604 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trav7n-5A0A075B604 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.19■■□□□ 1.14
Trav7n-5A0A075B604 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.19■■□□□ 1.14
Trav7n-5A0A075B604 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trav7n-5A0A075B604 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trav7n-5A0A075B604 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trav7n-5A0A075B604 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trav7n-5A0A075B604 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trav7n-5A0A075B604 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trav7n-5A0A075B604 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trav7n-5A0A075B604 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trav7n-5A0A075B604 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trav7n-5A0A075B604 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trav7n-5A0A075B604 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trav7n-5A0A075B604 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trav7n-5A0A075B604 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trav7n-5A0A075B604 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.99■■□□□ 1.11
Trav7n-5A0A075B604 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.99■■□□□ 1.11
Trav7n-5A0A075B604 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trav7n-5A0A075B604 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trav7n-5A0A075B604 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Trav7n-5A0A075B604 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trav7n-5A0A075B604 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trav7n-5A0A075B604 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trav7n-5A0A075B604 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trav7n-5A0A075B604 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trav7n-5A0A075B604 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trav7n-5A0A075B604 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trav7n-5A0A075B604 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trav7n-5A0A075B604 Mipep-204ENSMUST00000225043 1548 ntBASIC21.87■■□□□ 1.09
Trav7n-5A0A075B604 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trav7n-5A0A075B604 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Trav7n-5A0A075B604 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Trav7n-5A0A075B604 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trav7n-5A0A075B604 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trav7n-5A0A075B604 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trav7n-5A0A075B604 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trav7n-5A0A075B604 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trav7n-5A0A075B604 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trav7n-5A0A075B604 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trav7n-5A0A075B604 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trav7n-5A0A075B604 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.7■■□□□ 1.06
Trav7n-5A0A075B604 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.68■■□□□ 1.06
Trav7n-5A0A075B604 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trav7n-5A0A075B604 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trav7n-5A0A075B604 Gm24804-201ENSMUST00000174982 85 ntBASIC21.66■■□□□ 1.06
Trav7n-5A0A075B604 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trav7n-5A0A075B604 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trav7n-5A0A075B604 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trav7n-5A0A075B604 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Trav7n-5A0A075B604 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trav7n-5A0A075B604 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms