Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx6Q9R1R0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx6Q9R1R0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx6Q9R1R0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx6Q9R1R0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.81■□□□□ 0.76
Lhx6Q9R1R0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx6Q9R1R0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx6Q9R1R0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx6Q9R1R0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx6Q9R1R0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx6Q9R1R0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx6Q9R1R0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx6Q9R1R0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.79■□□□□ 0.76
Lhx6Q9R1R0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx6Q9R1R0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.79■□□□□ 0.76
Lhx6Q9R1R0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx6Q9R1R0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Lhx6Q9R1R0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx6Q9R1R0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.78■□□□□ 0.76
Lhx6Q9R1R0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx6Q9R1R0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.78■□□□□ 0.76
Lhx6Q9R1R0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx6Q9R1R0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx6Q9R1R0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx6Q9R1R0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.78■□□□□ 0.76
Lhx6Q9R1R0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx6Q9R1R0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Lhx6Q9R1R0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx6Q9R1R0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx6Q9R1R0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx6Q9R1R0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.77■□□□□ 0.76
Lhx6Q9R1R0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx6Q9R1R0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Lhx6Q9R1R0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Lhx6Q9R1R0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Lhx6Q9R1R0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Lhx6Q9R1R0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
Lhx6Q9R1R0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx6Q9R1R0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.76■□□□□ 0.75
Lhx6Q9R1R0 Gm27011-201ENSMUST00000182352 972 ntBASIC19.76■□□□□ 0.75
Lhx6Q9R1R0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Lhx6Q9R1R0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx6Q9R1R0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Lhx6Q9R1R0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx6Q9R1R0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx6Q9R1R0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx6Q9R1R0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx6Q9R1R0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.75■□□□□ 0.75
Lhx6Q9R1R0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx6Q9R1R0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx6Q9R1R0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx6Q9R1R0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx6Q9R1R0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.75■□□□□ 0.75
Lhx6Q9R1R0 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.75■□□□□ 0.75
Lhx6Q9R1R0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx6Q9R1R0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx6Q9R1R0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.74■□□□□ 0.75
Lhx6Q9R1R0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx6Q9R1R0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx6Q9R1R0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx6Q9R1R0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx6Q9R1R0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.74■□□□□ 0.75
Lhx6Q9R1R0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.74■□□□□ 0.75
Lhx6Q9R1R0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Lhx6Q9R1R0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx6Q9R1R0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx6Q9R1R0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx6Q9R1R0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Lhx6Q9R1R0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx6Q9R1R0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx6Q9R1R0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Lhx6Q9R1R0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx6Q9R1R0 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.73■□□□□ 0.75
Lhx6Q9R1R0 Golgb1-201ENSMUST00000023534 498 ntBASIC19.73■□□□□ 0.75
Lhx6Q9R1R0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx6Q9R1R0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx6Q9R1R0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx6Q9R1R0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lhx6Q9R1R0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Lhx6Q9R1R0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx6Q9R1R0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx6Q9R1R0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Lhx6Q9R1R0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Lhx6Q9R1R0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Lhx6Q9R1R0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx6Q9R1R0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx6Q9R1R0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lhx6Q9R1R0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.72■□□□□ 0.75
Lhx6Q9R1R0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx6Q9R1R0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.71■□□□□ 0.75
Lhx6Q9R1R0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx6Q9R1R0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.71■□□□□ 0.75
Lhx6Q9R1R0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx6Q9R1R0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx6Q9R1R0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lhx6Q9R1R0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx6Q9R1R0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx6Q9R1R0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Lhx6Q9R1R0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.7■□□□□ 0.74
Lhx6Q9R1R0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms