Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retreg3Q9CQV4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retreg3Q9CQV4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retreg3Q9CQV4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retreg3Q9CQV4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retreg3Q9CQV4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retreg3Q9CQV4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Retreg3Q9CQV4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retreg3Q9CQV4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.49■■□□□ 1.03
Retreg3Q9CQV4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retreg3Q9CQV4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retreg3Q9CQV4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.48■■□□□ 1.03
Retreg3Q9CQV4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retreg3Q9CQV4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.48■■□□□ 1.03
Retreg3Q9CQV4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retreg3Q9CQV4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retreg3Q9CQV4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retreg3Q9CQV4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Retreg3Q9CQV4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retreg3Q9CQV4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retreg3Q9CQV4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Retreg3Q9CQV4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retreg3Q9CQV4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retreg3Q9CQV4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
Retreg3Q9CQV4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retreg3Q9CQV4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
Retreg3Q9CQV4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retreg3Q9CQV4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retreg3Q9CQV4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retreg3Q9CQV4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Retreg3Q9CQV4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retreg3Q9CQV4 Gm45444-201ENSMUST00000211394 898 ntBASIC21.46■■□□□ 1.03
Retreg3Q9CQV4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.46■■□□□ 1.03
Retreg3Q9CQV4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.46■■□□□ 1.03
Retreg3Q9CQV4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retreg3Q9CQV4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retreg3Q9CQV4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retreg3Q9CQV4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Retreg3Q9CQV4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retreg3Q9CQV4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Retreg3Q9CQV4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.45■■□□□ 1.02
Retreg3Q9CQV4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retreg3Q9CQV4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Retreg3Q9CQV4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Retreg3Q9CQV4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Retreg3Q9CQV4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.43■■□□□ 1.02
Retreg3Q9CQV4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retreg3Q9CQV4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retreg3Q9CQV4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retreg3Q9CQV4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.43■■□□□ 1.02
Retreg3Q9CQV4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retreg3Q9CQV4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retreg3Q9CQV4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retreg3Q9CQV4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retreg3Q9CQV4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retreg3Q9CQV4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retreg3Q9CQV4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retreg3Q9CQV4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retreg3Q9CQV4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Retreg3Q9CQV4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Retreg3Q9CQV4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Retreg3Q9CQV4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retreg3Q9CQV4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retreg3Q9CQV4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Retreg3Q9CQV4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retreg3Q9CQV4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retreg3Q9CQV4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.41■■□□□ 1.02
Retreg3Q9CQV4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retreg3Q9CQV4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retreg3Q9CQV4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retreg3Q9CQV4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retreg3Q9CQV4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Retreg3Q9CQV4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retreg3Q9CQV4 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.4■■□□□ 1.02
Retreg3Q9CQV4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retreg3Q9CQV4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retreg3Q9CQV4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retreg3Q9CQV4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Retreg3Q9CQV4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Retreg3Q9CQV4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Retreg3Q9CQV4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Retreg3Q9CQV4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retreg3Q9CQV4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retreg3Q9CQV4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.39■■□□□ 1.01
Retreg3Q9CQV4 Gm43566-201ENSMUST00000196851 808 ntBASIC21.39■■□□□ 1.01
Retreg3Q9CQV4 Rps24-207ENSMUST00000224568 714 ntBASIC21.39■■□□□ 1.01
Retreg3Q9CQV4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Retreg3Q9CQV4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.38■■□□□ 1.01
Retreg3Q9CQV4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retreg3Q9CQV4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retreg3Q9CQV4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retreg3Q9CQV4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retreg3Q9CQV4 Gm44487-201ENSMUST00000205145 325 ntBASIC21.37■■□□□ 1.01
Retreg3Q9CQV4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retreg3Q9CQV4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Retreg3Q9CQV4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retreg3Q9CQV4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retreg3Q9CQV4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retreg3Q9CQV4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retreg3Q9CQV4 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms