Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm3P62311 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm3P62311 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm3P62311 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm3P62311 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Lsm3P62311 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm3P62311 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm3P62311 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Lsm3P62311 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lsm3P62311 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lsm3P62311 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Lsm3P62311 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm3P62311 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm3P62311 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm3P62311 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm3P62311 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm3P62311 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm3P62311 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.38■□□□□ 0.69
Lsm3P62311 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm3P62311 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm3P62311 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm3P62311 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm3P62311 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm3P62311 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.37■□□□□ 0.69
Lsm3P62311 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm3P62311 Gm9397-201ENSMUST00000200125 605 ntBASIC19.37■□□□□ 0.69
Lsm3P62311 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm3P62311 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm3P62311 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Lsm3P62311 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm3P62311 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.37■□□□□ 0.69
Lsm3P62311 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm3P62311 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Lsm3P62311 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm3P62311 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm3P62311 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm3P62311 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.36■□□□□ 0.69
Lsm3P62311 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.36■□□□□ 0.69
Lsm3P62311 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm3P62311 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Lsm3P62311 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm3P62311 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
Lsm3P62311 Gm22567-201ENSMUST00000175542 342 ntBASIC19.35■□□□□ 0.69
Lsm3P62311 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm3P62311 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm3P62311 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm3P62311 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm3P62311 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Lsm3P62311 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.34■□□□□ 0.69
Lsm3P62311 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm3P62311 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm3P62311 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm3P62311 Golph3-202ENSMUST00000226517 2359 ntBASIC19.34■□□□□ 0.69
Lsm3P62311 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm3P62311 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm3P62311 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.33■□□□□ 0.69
Lsm3P62311 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lsm3P62311 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lsm3P62311 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Lsm3P62311 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm3P62311 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm3P62311 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.33■□□□□ 0.68
Lsm3P62311 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm3P62311 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Lsm3P62311 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm3P62311 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm3P62311 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm3P62311 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm3P62311 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm3P62311 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.31■□□□□ 0.68
Lsm3P62311 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm3P62311 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm3P62311 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm3P62311 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm3P62311 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm3P62311 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm3P62311 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm3P62311 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm3P62311 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm3P62311 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm3P62311 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Lsm3P62311 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm3P62311 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm3P62311 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm3P62311 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm3P62311 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm3P62311 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm3P62311 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm3P62311 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm3P62311 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm3P62311 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm3P62311 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lsm3P62311 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm3P62311 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm3P62311 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm3P62311 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm3P62311 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm3P62311 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Lsm3P62311 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm3P62311 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms