Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Best1O88870 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.7■□□□□ 0.9
Best1O88870 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Best1O88870 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Best1O88870 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Best1O88870 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Best1O88870 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Best1O88870 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Best1O88870 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Best1O88870 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Best1O88870 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Best1O88870 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Best1O88870 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Best1O88870 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Best1O88870 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.68■□□□□ 0.9
Best1O88870 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Best1O88870 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Best1O88870 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Best1O88870 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.67■□□□□ 0.9
Best1O88870 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Best1O88870 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.67■□□□□ 0.9
Best1O88870 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.67■□□□□ 0.9
Best1O88870 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.67■□□□□ 0.9
Best1O88870 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Best1O88870 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Best1O88870 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Best1O88870 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Best1O88870 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Best1O88870 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.65■□□□□ 0.9
Best1O88870 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Best1O88870 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Best1O88870 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.65■□□□□ 0.9
Best1O88870 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Best1O88870 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Best1O88870 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Best1O88870 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.64■□□□□ 0.89
Best1O88870 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Best1O88870 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Best1O88870 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Best1O88870 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Best1O88870 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.63■□□□□ 0.89
Best1O88870 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Best1O88870 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Best1O88870 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Best1O88870 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Best1O88870 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.62■□□□□ 0.89
Best1O88870 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Best1O88870 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Best1O88870 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Best1O88870 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Best1O88870 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.61■□□□□ 0.89
Best1O88870 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.61■□□□□ 0.89
Best1O88870 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Best1O88870 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Best1O88870 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Best1O88870 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Best1O88870 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Best1O88870 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Best1O88870 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Best1O88870 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Best1O88870 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Best1O88870 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Best1O88870 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.6■□□□□ 0.89
Best1O88870 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.6■□□□□ 0.89
Best1O88870 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Best1O88870 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Best1O88870 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.6■□□□□ 0.89
Best1O88870 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Best1O88870 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Best1O88870 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Best1O88870 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.59■□□□□ 0.89
Best1O88870 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.59■□□□□ 0.89
Best1O88870 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Best1O88870 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Best1O88870 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.58■□□□□ 0.89
Best1O88870 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Best1O88870 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Best1O88870 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.58■□□□□ 0.89
Best1O88870 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Best1O88870 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Best1O88870 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Best1O88870 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Best1O88870 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Best1O88870 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Best1O88870 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Best1O88870 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Best1O88870 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Best1O88870 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.57■□□□□ 0.88
Best1O88870 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Best1O88870 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Best1O88870 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.56■□□□□ 0.88
Best1O88870 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Best1O88870 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Best1O88870 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Best1O88870 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Best1O88870 Gm22238-201ENSMUST00000175222 88 ntBASIC20.56■□□□□ 0.88
Best1O88870 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.56■□□□□ 0.88
Best1O88870 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Best1O88870 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.56■□□□□ 0.88
Best1O88870 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms