Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tspan6O70401 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Tspan6O70401 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tspan6O70401 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tspan6O70401 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tspan6O70401 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tspan6O70401 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tspan6O70401 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.9■□□□□ 0.94
Tspan6O70401 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tspan6O70401 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Tspan6O70401 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.89■□□□□ 0.93
Tspan6O70401 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tspan6O70401 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tspan6O70401 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Tspan6O70401 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tspan6O70401 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tspan6O70401 Gm12922-201ENSMUST00000120626 809 ntBASIC20.88■□□□□ 0.93
Tspan6O70401 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tspan6O70401 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tspan6O70401 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tspan6O70401 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tspan6O70401 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tspan6O70401 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tspan6O70401 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tspan6O70401 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.87■□□□□ 0.93
Tspan6O70401 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.87■□□□□ 0.93
Tspan6O70401 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tspan6O70401 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tspan6O70401 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tspan6O70401 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tspan6O70401 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tspan6O70401 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tspan6O70401 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Tspan6O70401 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.85■□□□□ 0.93
Tspan6O70401 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tspan6O70401 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tspan6O70401 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tspan6O70401 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tspan6O70401 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
Tspan6O70401 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tspan6O70401 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tspan6O70401 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tspan6O70401 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tspan6O70401 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Tspan6O70401 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tspan6O70401 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Tspan6O70401 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tspan6O70401 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tspan6O70401 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tspan6O70401 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tspan6O70401 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tspan6O70401 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Tspan6O70401 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tspan6O70401 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Tspan6O70401 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.83■□□□□ 0.93
Tspan6O70401 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.83■□□□□ 0.93
Tspan6O70401 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tspan6O70401 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tspan6O70401 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.82■□□□□ 0.92
Tspan6O70401 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
Tspan6O70401 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.82■□□□□ 0.92
Tspan6O70401 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tspan6O70401 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tspan6O70401 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Tspan6O70401 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tspan6O70401 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.81■□□□□ 0.92
Tspan6O70401 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Tspan6O70401 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Tspan6O70401 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.8■□□□□ 0.92
Tspan6O70401 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tspan6O70401 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tspan6O70401 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.8■□□□□ 0.92
Tspan6O70401 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tspan6O70401 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tspan6O70401 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Tspan6O70401 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tspan6O70401 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tspan6O70401 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tspan6O70401 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tspan6O70401 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tspan6O70401 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Tspan6O70401 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tspan6O70401 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.78■□□□□ 0.92
Tspan6O70401 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tspan6O70401 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Tspan6O70401 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tspan6O70401 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tspan6O70401 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tspan6O70401 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tspan6O70401 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.77■□□□□ 0.92
Tspan6O70401 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tspan6O70401 Gm21956-201ENSMUST00000179946 522 ntBASIC20.77■□□□□ 0.92
Tspan6O70401 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.77■□□□□ 0.92
Tspan6O70401 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tspan6O70401 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tspan6O70401 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tspan6O70401 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tspan6O70401 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Tspan6O70401 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tspan6O70401 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 143.8 ms