Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BckdkO55028 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.67■□□□□ 0.74
BckdkO55028 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BckdkO55028 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BckdkO55028 Gm13238-201ENSMUST00000117655 780 ntBASIC19.66■□□□□ 0.74
BckdkO55028 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.66■□□□□ 0.74
BckdkO55028 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
BckdkO55028 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BckdkO55028 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BckdkO55028 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BckdkO55028 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BckdkO55028 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.65■□□□□ 0.74
BckdkO55028 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BckdkO55028 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BckdkO55028 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BckdkO55028 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BckdkO55028 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BckdkO55028 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BckdkO55028 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BckdkO55028 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
BckdkO55028 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BckdkO55028 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
BckdkO55028 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
BckdkO55028 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
BckdkO55028 Gm15820-201ENSMUST00000201566 728 ntBASIC19.63■□□□□ 0.73
BckdkO55028 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.63■□□□□ 0.73
BckdkO55028 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BckdkO55028 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BckdkO55028 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BckdkO55028 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BckdkO55028 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BckdkO55028 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.62■□□□□ 0.73
BckdkO55028 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
BckdkO55028 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BckdkO55028 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BckdkO55028 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.61■□□□□ 0.73
BckdkO55028 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
BckdkO55028 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.61■□□□□ 0.73
BckdkO55028 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.61■□□□□ 0.73
BckdkO55028 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BckdkO55028 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.6■□□□□ 0.73
BckdkO55028 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.6■□□□□ 0.73
BckdkO55028 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BckdkO55028 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
BckdkO55028 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.6■□□□□ 0.73
BckdkO55028 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BckdkO55028 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BckdkO55028 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BckdkO55028 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.6■□□□□ 0.73
BckdkO55028 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
BckdkO55028 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BckdkO55028 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BckdkO55028 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BckdkO55028 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BckdkO55028 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BckdkO55028 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
BckdkO55028 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BckdkO55028 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
BckdkO55028 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.59■□□□□ 0.73
BckdkO55028 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
BckdkO55028 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BckdkO55028 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BckdkO55028 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.58■□□□□ 0.73
BckdkO55028 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BckdkO55028 Gm22567-201ENSMUST00000175542 342 ntBASIC19.58■□□□□ 0.72
BckdkO55028 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
BckdkO55028 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
BckdkO55028 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.57■□□□□ 0.72
BckdkO55028 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
BckdkO55028 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
BckdkO55028 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BckdkO55028 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.57■□□□□ 0.72
BckdkO55028 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BckdkO55028 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BckdkO55028 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
BckdkO55028 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BckdkO55028 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BckdkO55028 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BckdkO55028 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BckdkO55028 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
BckdkO55028 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
BckdkO55028 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
BckdkO55028 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
BckdkO55028 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
BckdkO55028 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
BckdkO55028 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
BckdkO55028 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
BckdkO55028 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
BckdkO55028 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
BckdkO55028 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BckdkO55028 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
BckdkO55028 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BckdkO55028 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BckdkO55028 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.54■□□□□ 0.72
BckdkO55028 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.54■□□□□ 0.72
BckdkO55028 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.54■□□□□ 0.72
BckdkO55028 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
BckdkO55028 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BckdkO55028 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BckdkO55028 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms