Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Dkk1O54908 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Dkk1O54908 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dkk1O54908 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Dkk1O54908 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Dkk1O54908 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dkk1O54908 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Dkk1O54908 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.4■□□□□ 0.54
Dkk1O54908 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Dkk1O54908 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Dkk1O54908 Gm44044-201ENSMUST00000205178 1089 ntBASIC18.39■□□□□ 0.53
Dkk1O54908 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dkk1O54908 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Dkk1O54908 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.39■□□□□ 0.53
Dkk1O54908 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dkk1O54908 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Dkk1O54908 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Dkk1O54908 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Dkk1O54908 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.38■□□□□ 0.53
Dkk1O54908 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.38■□□□□ 0.53
Dkk1O54908 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Dkk1O54908 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Dkk1O54908 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.38■□□□□ 0.53
Dkk1O54908 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Dkk1O54908 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dkk1O54908 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dkk1O54908 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dkk1O54908 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Dkk1O54908 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Dkk1O54908 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Dkk1O54908 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Dkk1O54908 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Dkk1O54908 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Dkk1O54908 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dkk1O54908 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Dkk1O54908 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Dkk1O54908 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC18.36■□□□□ 0.53
Dkk1O54908 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Dkk1O54908 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dkk1O54908 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Dkk1O54908 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC18.35■□□□□ 0.53
Dkk1O54908 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.35■□□□□ 0.53
Dkk1O54908 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.35■□□□□ 0.53
Dkk1O54908 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.35■□□□□ 0.53
Dkk1O54908 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Dkk1O54908 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dkk1O54908 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dkk1O54908 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Dkk1O54908 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.34■□□□□ 0.53
Dkk1O54908 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dkk1O54908 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Dkk1O54908 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Dkk1O54908 Gm18515-201ENSMUST00000219755 797 ntBASIC18.34■□□□□ 0.53
Dkk1O54908 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dkk1O54908 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dkk1O54908 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.34■□□□□ 0.53
Dkk1O54908 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Dkk1O54908 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Dkk1O54908 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Dkk1O54908 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Dkk1O54908 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Dkk1O54908 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Dkk1O54908 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Dkk1O54908 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Dkk1O54908 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Dkk1O54908 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Dkk1O54908 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Dkk1O54908 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Dkk1O54908 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.32■□□□□ 0.52
Dkk1O54908 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dkk1O54908 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dkk1O54908 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Dkk1O54908 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.31■□□□□ 0.52
Dkk1O54908 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Dkk1O54908 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dkk1O54908 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.3■□□□□ 0.52
Dkk1O54908 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dkk1O54908 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Dkk1O54908 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Dkk1O54908 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dkk1O54908 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Dkk1O54908 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dkk1O54908 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.3■□□□□ 0.52
Dkk1O54908 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dkk1O54908 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Dkk1O54908 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dkk1O54908 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Dkk1O54908 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Dkk1O54908 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.29■□□□□ 0.52
Dkk1O54908 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dkk1O54908 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dkk1O54908 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Dkk1O54908 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dkk1O54908 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.29■□□□□ 0.52
Dkk1O54908 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dkk1O54908 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.29■□□□□ 0.52
Dkk1O54908 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dkk1O54908 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dkk1O54908 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Dkk1O54908 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms