Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf4lE9Q2N0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cpsf4lE9Q2N0 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.12■□□□□ 0.49
Cpsf4lE9Q2N0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf4lE9Q2N0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf4lE9Q2N0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.12■□□□□ 0.49
Cpsf4lE9Q2N0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf4lE9Q2N0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf4lE9Q2N0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf4lE9Q2N0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf4lE9Q2N0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf4lE9Q2N0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf4lE9Q2N0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf4lE9Q2N0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf4lE9Q2N0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.1■□□□□ 0.49
Cpsf4lE9Q2N0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.1■□□□□ 0.49
Cpsf4lE9Q2N0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf4lE9Q2N0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf4lE9Q2N0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf4lE9Q2N0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cpsf4lE9Q2N0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cpsf4lE9Q2N0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cpsf4lE9Q2N0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf4lE9Q2N0 Gm43566-201ENSMUST00000196851 808 ntBASIC18.09■□□□□ 0.49
Cpsf4lE9Q2N0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf4lE9Q2N0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf4lE9Q2N0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf4lE9Q2N0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cpsf4lE9Q2N0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cpsf4lE9Q2N0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpsf4lE9Q2N0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpsf4lE9Q2N0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cpsf4lE9Q2N0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cpsf4lE9Q2N0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
Cpsf4lE9Q2N0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.08■□□□□ 0.48
Cpsf4lE9Q2N0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cpsf4lE9Q2N0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Cpsf4lE9Q2N0 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.07■□□□□ 0.48
Cpsf4lE9Q2N0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4lE9Q2N0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4lE9Q2N0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4lE9Q2N0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4lE9Q2N0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cpsf4lE9Q2N0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf4lE9Q2N0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf4lE9Q2N0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cpsf4lE9Q2N0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.06■□□□□ 0.48
Cpsf4lE9Q2N0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.48
Cpsf4lE9Q2N0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.06■□□□□ 0.48
Cpsf4lE9Q2N0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf4lE9Q2N0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf4lE9Q2N0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf4lE9Q2N0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf4lE9Q2N0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Cpsf4lE9Q2N0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf4lE9Q2N0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cpsf4lE9Q2N0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf4lE9Q2N0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf4lE9Q2N0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf4lE9Q2N0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cpsf4lE9Q2N0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf4lE9Q2N0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf4lE9Q2N0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf4lE9Q2N0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4lE9Q2N0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4lE9Q2N0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cpsf4lE9Q2N0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4lE9Q2N0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4lE9Q2N0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4lE9Q2N0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4lE9Q2N0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4lE9Q2N0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.03■□□□□ 0.48
Cpsf4lE9Q2N0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4lE9Q2N0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4lE9Q2N0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4lE9Q2N0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4lE9Q2N0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4lE9Q2N0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4lE9Q2N0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4lE9Q2N0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf4lE9Q2N0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.02■□□□□ 0.48
Cpsf4lE9Q2N0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.02■□□□□ 0.48
Cpsf4lE9Q2N0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf4lE9Q2N0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Cpsf4lE9Q2N0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cpsf4lE9Q2N0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4lE9Q2N0 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.01■□□□□ 0.47
Cpsf4lE9Q2N0 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.01■□□□□ 0.47
Cpsf4lE9Q2N0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4lE9Q2N0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cpsf4lE9Q2N0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.01■□□□□ 0.47
Cpsf4lE9Q2N0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Cpsf4lE9Q2N0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4lE9Q2N0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.01■□□□□ 0.47
Cpsf4lE9Q2N0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4lE9Q2N0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4lE9Q2N0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4lE9Q2N0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4lE9Q2N0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4lE9Q2N0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms