Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lnp1A0A1B0GSK3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.73■□□□□ 0.43
Lnp1A0A1B0GSK3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lnp1A0A1B0GSK3 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.73■□□□□ 0.43
Lnp1A0A1B0GSK3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lnp1A0A1B0GSK3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.73■□□□□ 0.43
Lnp1A0A1B0GSK3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lnp1A0A1B0GSK3 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.72■□□□□ 0.43
Lnp1A0A1B0GSK3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.72■□□□□ 0.43
Lnp1A0A1B0GSK3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Lnp1A0A1B0GSK3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lnp1A0A1B0GSK3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lnp1A0A1B0GSK3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lnp1A0A1B0GSK3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lnp1A0A1B0GSK3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.71■□□□□ 0.43
Lnp1A0A1B0GSK3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lnp1A0A1B0GSK3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.7■□□□□ 0.42
Lnp1A0A1B0GSK3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lnp1A0A1B0GSK3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lnp1A0A1B0GSK3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lnp1A0A1B0GSK3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lnp1A0A1B0GSK3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lnp1A0A1B0GSK3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lnp1A0A1B0GSK3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lnp1A0A1B0GSK3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lnp1A0A1B0GSK3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.69■□□□□ 0.42
Lnp1A0A1B0GSK3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lnp1A0A1B0GSK3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Lnp1A0A1B0GSK3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lnp1A0A1B0GSK3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lnp1A0A1B0GSK3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lnp1A0A1B0GSK3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.69■□□□□ 0.42
Lnp1A0A1B0GSK3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
Lnp1A0A1B0GSK3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Lnp1A0A1B0GSK3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.68■□□□□ 0.42
Lnp1A0A1B0GSK3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lnp1A0A1B0GSK3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lnp1A0A1B0GSK3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lnp1A0A1B0GSK3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lnp1A0A1B0GSK3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lnp1A0A1B0GSK3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Lnp1A0A1B0GSK3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lnp1A0A1B0GSK3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lnp1A0A1B0GSK3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lnp1A0A1B0GSK3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lnp1A0A1B0GSK3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lnp1A0A1B0GSK3 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.67■□□□□ 0.42
Lnp1A0A1B0GSK3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lnp1A0A1B0GSK3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lnp1A0A1B0GSK3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Lnp1A0A1B0GSK3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Lnp1A0A1B0GSK3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lnp1A0A1B0GSK3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Lnp1A0A1B0GSK3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lnp1A0A1B0GSK3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lnp1A0A1B0GSK3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lnp1A0A1B0GSK3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lnp1A0A1B0GSK3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Lnp1A0A1B0GSK3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.66■□□□□ 0.42
Lnp1A0A1B0GSK3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lnp1A0A1B0GSK3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lnp1A0A1B0GSK3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lnp1A0A1B0GSK3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lnp1A0A1B0GSK3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lnp1A0A1B0GSK3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lnp1A0A1B0GSK3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lnp1A0A1B0GSK3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Lnp1A0A1B0GSK3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lnp1A0A1B0GSK3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lnp1A0A1B0GSK3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lnp1A0A1B0GSK3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lnp1A0A1B0GSK3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lnp1A0A1B0GSK3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lnp1A0A1B0GSK3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lnp1A0A1B0GSK3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lnp1A0A1B0GSK3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Lnp1A0A1B0GSK3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lnp1A0A1B0GSK3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Lnp1A0A1B0GSK3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.63■□□□□ 0.41
Lnp1A0A1B0GSK3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.63■□□□□ 0.41
Lnp1A0A1B0GSK3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lnp1A0A1B0GSK3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lnp1A0A1B0GSK3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lnp1A0A1B0GSK3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lnp1A0A1B0GSK3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lnp1A0A1B0GSK3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lnp1A0A1B0GSK3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lnp1A0A1B0GSK3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lnp1A0A1B0GSK3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lnp1A0A1B0GSK3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lnp1A0A1B0GSK3 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.62■□□□□ 0.41
Lnp1A0A1B0GSK3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lnp1A0A1B0GSK3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.62■□□□□ 0.41
Lnp1A0A1B0GSK3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lnp1A0A1B0GSK3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.61■□□□□ 0.41
Lnp1A0A1B0GSK3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lnp1A0A1B0GSK3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.61■□□□□ 0.41
Lnp1A0A1B0GSK3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.61■□□□□ 0.41
Lnp1A0A1B0GSK3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.6■□□□□ 0.41
Lnp1A0A1B0GSK3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms