Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv29A0A0G2LB96 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv29A0A0G2LB96 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv29A0A0G2LB96 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv29A0A0G2LB96 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trbv29A0A0G2LB96 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv29A0A0G2LB96 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.69■□□□□ 0.42
Trbv29A0A0G2LB96 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Trbv29A0A0G2LB96 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv29A0A0G2LB96 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv29A0A0G2LB96 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trbv29A0A0G2LB96 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.69■□□□□ 0.42
Trbv29A0A0G2LB96 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv29A0A0G2LB96 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv29A0A0G2LB96 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv29A0A0G2LB96 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv29A0A0G2LB96 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv29A0A0G2LB96 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.68■□□□□ 0.42
Trbv29A0A0G2LB96 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trbv29A0A0G2LB96 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv29A0A0G2LB96 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv29A0A0G2LB96 Gm6311-201ENSMUST00000073790 878 ntBASIC17.68■□□□□ 0.42
Trbv29A0A0G2LB96 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv29A0A0G2LB96 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trbv29A0A0G2LB96 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv29A0A0G2LB96 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trbv29A0A0G2LB96 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv29A0A0G2LB96 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv29A0A0G2LB96 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv29A0A0G2LB96 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trbv29A0A0G2LB96 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv29A0A0G2LB96 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.66■□□□□ 0.42
Trbv29A0A0G2LB96 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv29A0A0G2LB96 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv29A0A0G2LB96 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv29A0A0G2LB96 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv29A0A0G2LB96 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv29A0A0G2LB96 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv29A0A0G2LB96 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv29A0A0G2LB96 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv29A0A0G2LB96 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trbv29A0A0G2LB96 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv29A0A0G2LB96 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trbv29A0A0G2LB96 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv29A0A0G2LB96 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
Trbv29A0A0G2LB96 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.65■□□□□ 0.42
Trbv29A0A0G2LB96 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv29A0A0G2LB96 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv29A0A0G2LB96 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv29A0A0G2LB96 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv29A0A0G2LB96 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv29A0A0G2LB96 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv29A0A0G2LB96 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.64■□□□□ 0.41
Trbv29A0A0G2LB96 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv29A0A0G2LB96 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trbv29A0A0G2LB96 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trbv29A0A0G2LB96 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv29A0A0G2LB96 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv29A0A0G2LB96 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.63■□□□□ 0.41
Trbv29A0A0G2LB96 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
Trbv29A0A0G2LB96 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv29A0A0G2LB96 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv29A0A0G2LB96 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trbv29A0A0G2LB96 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv29A0A0G2LB96 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv29A0A0G2LB96 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.63■□□□□ 0.41
Trbv29A0A0G2LB96 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv29A0A0G2LB96 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv29A0A0G2LB96 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv29A0A0G2LB96 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv29A0A0G2LB96 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv29A0A0G2LB96 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv29A0A0G2LB96 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trbv29A0A0G2LB96 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv29A0A0G2LB96 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trbv29A0A0G2LB96 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv29A0A0G2LB96 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Trbv29A0A0G2LB96 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv29A0A0G2LB96 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv29A0A0G2LB96 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv29A0A0G2LB96 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv29A0A0G2LB96 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv29A0A0G2LB96 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv29A0A0G2LB96 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv29A0A0G2LB96 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv29A0A0G2LB96 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trbv29A0A0G2LB96 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv29A0A0G2LB96 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv29A0A0G2LB96 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv29A0A0G2LB96 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv29A0A0G2LB96 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv29A0A0G2LB96 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.59■□□□□ 0.41
Trbv29A0A0G2LB96 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv29A0A0G2LB96 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv29A0A0G2LB96 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv29A0A0G2LB96 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
Trbv29A0A0G2LB96 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trbv29A0A0G2LB96 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv29A0A0G2LB96 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv29A0A0G2LB96 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms