Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv20A0A0B4J1H5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv20A0A0B4J1H5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.09■□□□□ 0.65
Trbv20A0A0B4J1H5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv20A0A0B4J1H5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv20A0A0B4J1H5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.09■□□□□ 0.65
Trbv20A0A0B4J1H5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv20A0A0B4J1H5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trbv20A0A0B4J1H5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
Trbv20A0A0B4J1H5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trbv20A0A0B4J1H5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv20A0A0B4J1H5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv20A0A0B4J1H5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv20A0A0B4J1H5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv20A0A0B4J1H5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv20A0A0B4J1H5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv20A0A0B4J1H5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv20A0A0B4J1H5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Trbv20A0A0B4J1H5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trbv20A0A0B4J1H5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv20A0A0B4J1H5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Gm4799-201ENSMUST00000095396 657 ntBASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv20A0A0B4J1H5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv20A0A0B4J1H5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trbv20A0A0B4J1H5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv20A0A0B4J1H5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv20A0A0B4J1H5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv20A0A0B4J1H5 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.04■□□□□ 0.64
Trbv20A0A0B4J1H5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv20A0A0B4J1H5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv20A0A0B4J1H5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.03■□□□□ 0.64
Trbv20A0A0B4J1H5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv20A0A0B4J1H5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trbv20A0A0B4J1H5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv20A0A0B4J1H5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv20A0A0B4J1H5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.03■□□□□ 0.64
Trbv20A0A0B4J1H5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv20A0A0B4J1H5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv20A0A0B4J1H5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv20A0A0B4J1H5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.02■□□□□ 0.64
Trbv20A0A0B4J1H5 Terc-201ENSMUST00000082862 423 ntBASIC19.02■□□□□ 0.64
Trbv20A0A0B4J1H5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv20A0A0B4J1H5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv20A0A0B4J1H5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trbv20A0A0B4J1H5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trbv20A0A0B4J1H5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.63
Trbv20A0A0B4J1H5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv20A0A0B4J1H5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.01■□□□□ 0.63
Trbv20A0A0B4J1H5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv20A0A0B4J1H5 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.01■□□□□ 0.63
Trbv20A0A0B4J1H5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trbv20A0A0B4J1H5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv20A0A0B4J1H5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv20A0A0B4J1H5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Gm15043-201ENSMUST00000118843 1543 ntBASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Gm34220-201ENSMUST00000223001 2709 ntBASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv20A0A0B4J1H5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv20A0A0B4J1H5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv20A0A0B4J1H5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trbv20A0A0B4J1H5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv20A0A0B4J1H5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv20A0A0B4J1H5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.98■□□□□ 0.63
Trbv20A0A0B4J1H5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Trbv20A0A0B4J1H5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv20A0A0B4J1H5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv20A0A0B4J1H5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv20A0A0B4J1H5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv20A0A0B4J1H5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv20A0A0B4J1H5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms