Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav10A0A075B642 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.9■□□□□ 0.62
Trav10A0A075B642 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.9■□□□□ 0.62
Trav10A0A075B642 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Trav10A0A075B642 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.89■□□□□ 0.61
Trav10A0A075B642 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.89■□□□□ 0.61
Trav10A0A075B642 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav10A0A075B642 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav10A0A075B642 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Trav10A0A075B642 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
Trav10A0A075B642 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav10A0A075B642 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav10A0A075B642 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Trav10A0A075B642 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav10A0A075B642 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav10A0A075B642 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav10A0A075B642 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav10A0A075B642 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav10A0A075B642 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav10A0A075B642 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.87■□□□□ 0.61
Trav10A0A075B642 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.87■□□□□ 0.61
Trav10A0A075B642 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav10A0A075B642 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Trav10A0A075B642 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav10A0A075B642 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav10A0A075B642 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav10A0A075B642 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav10A0A075B642 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav10A0A075B642 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav10A0A075B642 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trav10A0A075B642 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.86■□□□□ 0.61
Trav10A0A075B642 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trav10A0A075B642 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav10A0A075B642 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.86■□□□□ 0.61
Trav10A0A075B642 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav10A0A075B642 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav10A0A075B642 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav10A0A075B642 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trav10A0A075B642 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav10A0A075B642 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Trav10A0A075B642 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav10A0A075B642 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav10A0A075B642 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav10A0A075B642 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.84■□□□□ 0.61
Trav10A0A075B642 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav10A0A075B642 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav10A0A075B642 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trav10A0A075B642 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.84■□□□□ 0.61
Trav10A0A075B642 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Trav10A0A075B642 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav10A0A075B642 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trav10A0A075B642 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trav10A0A075B642 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trav10A0A075B642 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav10A0A075B642 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav10A0A075B642 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav10A0A075B642 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav10A0A075B642 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trav10A0A075B642 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav10A0A075B642 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav10A0A075B642 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.82■□□□□ 0.6
Trav10A0A075B642 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav10A0A075B642 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav10A0A075B642 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav10A0A075B642 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav10A0A075B642 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav10A0A075B642 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.81■□□□□ 0.6
Trav10A0A075B642 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav10A0A075B642 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.81■□□□□ 0.6
Trav10A0A075B642 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav10A0A075B642 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav10A0A075B642 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav10A0A075B642 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav10A0A075B642 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav10A0A075B642 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav10A0A075B642 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.8■□□□□ 0.6
Trav10A0A075B642 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trav10A0A075B642 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav10A0A075B642 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav10A0A075B642 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.79■□□□□ 0.6
Trav10A0A075B642 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.79■□□□□ 0.6
Trav10A0A075B642 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav10A0A075B642 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav10A0A075B642 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav10A0A075B642 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trav10A0A075B642 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav10A0A075B642 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.78■□□□□ 0.6
Trav10A0A075B642 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav10A0A075B642 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav10A0A075B642 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav10A0A075B642 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav10A0A075B642 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav10A0A075B642 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav10A0A075B642 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav10A0A075B642 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trav10A0A075B642 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav10A0A075B642 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav10A0A075B642 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trav10A0A075B642 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav10A0A075B642 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms