Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-4A0A075B631 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-4A0A075B631 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9n-4A0A075B631 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9n-4A0A075B631 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav9n-4A0A075B631 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9n-4A0A075B631 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9n-4A0A075B631 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.52□□□□□ -0.08
Trav9n-4A0A075B631 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9n-4A0A075B631 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav9n-4A0A075B631 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.52□□□□□ -0.09
Trav9n-4A0A075B631 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC14.52□□□□□ -0.09
Trav9n-4A0A075B631 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9n-4A0A075B631 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9n-4A0A075B631 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9n-4A0A075B631 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav9n-4A0A075B631 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9n-4A0A075B631 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Trav9n-4A0A075B631 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trav9n-4A0A075B631 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav9n-4A0A075B631 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav9n-4A0A075B631 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9n-4A0A075B631 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9n-4A0A075B631 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9n-4A0A075B631 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9n-4A0A075B631 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav9n-4A0A075B631 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-4A0A075B631 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-4A0A075B631 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-4A0A075B631 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-4A0A075B631 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-4A0A075B631 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-4A0A075B631 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-4A0A075B631 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
Trav9n-4A0A075B631 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9n-4A0A075B631 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9n-4A0A075B631 Gm20634-201ENSMUST00000090779 2956 ntBASIC14.49□□□□□ -0.09
Trav9n-4A0A075B631 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav9n-4A0A075B631 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav9n-4A0A075B631 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9n-4A0A075B631 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav9n-4A0A075B631 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav9n-4A0A075B631 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav9n-4A0A075B631 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav9n-4A0A075B631 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9n-4A0A075B631 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9n-4A0A075B631 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9n-4A0A075B631 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9n-4A0A075B631 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-4A0A075B631 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-4A0A075B631 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-4A0A075B631 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-4A0A075B631 Gm32051-202ENSMUST00000197905 2385 ntBASIC14.48□□□□□ -0.09
Trav9n-4A0A075B631 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-4A0A075B631 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC14.48□□□□□ -0.09
Trav9n-4A0A075B631 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-4A0A075B631 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-4A0A075B631 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-4A0A075B631 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-4A0A075B631 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9n-4A0A075B631 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav9n-4A0A075B631 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9n-4A0A075B631 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9n-4A0A075B631 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9n-4A0A075B631 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9n-4A0A075B631 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9n-4A0A075B631 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9n-4A0A075B631 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav9n-4A0A075B631 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9n-4A0A075B631 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9n-4A0A075B631 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9n-4A0A075B631 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav9n-4A0A075B631 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9n-4A0A075B631 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9n-4A0A075B631 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Trav9n-4A0A075B631 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC14.45□□□□□ -0.1
Trav9n-4A0A075B631 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav9n-4A0A075B631 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9n-4A0A075B631 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trav9n-4A0A075B631 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9n-4A0A075B631 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9n-4A0A075B631 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Gm6277-202ENSMUST00000224036 2779 ntBASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms