Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upk1bQ9Z2C6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upk1bQ9Z2C6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upk1bQ9Z2C6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Upk1bQ9Z2C6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Upk1bQ9Z2C6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upk1bQ9Z2C6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Upk1bQ9Z2C6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upk1bQ9Z2C6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Upk1bQ9Z2C6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upk1bQ9Z2C6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upk1bQ9Z2C6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upk1bQ9Z2C6 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.88■□□□□ 0.77
Upk1bQ9Z2C6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upk1bQ9Z2C6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upk1bQ9Z2C6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upk1bQ9Z2C6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.88■□□□□ 0.77
Upk1bQ9Z2C6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Upk1bQ9Z2C6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upk1bQ9Z2C6 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.87■□□□□ 0.77
Upk1bQ9Z2C6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.87■□□□□ 0.77
Upk1bQ9Z2C6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upk1bQ9Z2C6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Upk1bQ9Z2C6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Upk1bQ9Z2C6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Upk1bQ9Z2C6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upk1bQ9Z2C6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Upk1bQ9Z2C6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.86■□□□□ 0.77
Upk1bQ9Z2C6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Upk1bQ9Z2C6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Upk1bQ9Z2C6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upk1bQ9Z2C6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upk1bQ9Z2C6 Gm45364-201ENSMUST00000210883 159 ntBASIC19.85■□□□□ 0.77
Upk1bQ9Z2C6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Upk1bQ9Z2C6 Notumos-201ENSMUST00000151998 2659 ntBASIC19.85■□□□□ 0.77
Upk1bQ9Z2C6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upk1bQ9Z2C6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Upk1bQ9Z2C6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1bQ9Z2C6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1bQ9Z2C6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1bQ9Z2C6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1bQ9Z2C6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk1bQ9Z2C6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upk1bQ9Z2C6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upk1bQ9Z2C6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upk1bQ9Z2C6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Upk1bQ9Z2C6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk1bQ9Z2C6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk1bQ9Z2C6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Upk1bQ9Z2C6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk1bQ9Z2C6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Upk1bQ9Z2C6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upk1bQ9Z2C6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Upk1bQ9Z2C6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Upk1bQ9Z2C6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Upk1bQ9Z2C6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upk1bQ9Z2C6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upk1bQ9Z2C6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Upk1bQ9Z2C6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Upk1bQ9Z2C6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upk1bQ9Z2C6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upk1bQ9Z2C6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upk1bQ9Z2C6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.8■□□□□ 0.76
Upk1bQ9Z2C6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upk1bQ9Z2C6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Upk1bQ9Z2C6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upk1bQ9Z2C6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upk1bQ9Z2C6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk1bQ9Z2C6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk1bQ9Z2C6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk1bQ9Z2C6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk1bQ9Z2C6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk1bQ9Z2C6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk1bQ9Z2C6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.79■□□□□ 0.76
Upk1bQ9Z2C6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
Upk1bQ9Z2C6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk1bQ9Z2C6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk1bQ9Z2C6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk1bQ9Z2C6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Upk1bQ9Z2C6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Upk1bQ9Z2C6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upk1bQ9Z2C6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upk1bQ9Z2C6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Upk1bQ9Z2C6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upk1bQ9Z2C6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upk1bQ9Z2C6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
Upk1bQ9Z2C6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Upk1bQ9Z2C6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Upk1bQ9Z2C6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.77■□□□□ 0.76
Upk1bQ9Z2C6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
Upk1bQ9Z2C6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upk1bQ9Z2C6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Upk1bQ9Z2C6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Upk1bQ9Z2C6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Upk1bQ9Z2C6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upk1bQ9Z2C6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upk1bQ9Z2C6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upk1bQ9Z2C6 Gm8503-201ENSMUST00000118131 455 ntBASIC19.75■□□□□ 0.75
Upk1bQ9Z2C6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upk1bQ9Z2C6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms