Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh20Q9Z0M3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cdh20Q9Z0M3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh20Q9Z0M3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh20Q9Z0M3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.84■□□□□ 0.77
Cdh20Q9Z0M3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh20Q9Z0M3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh20Q9Z0M3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh20Q9Z0M3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Cdh20Q9Z0M3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdh20Q9Z0M3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.83■□□□□ 0.77
Cdh20Q9Z0M3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cdh20Q9Z0M3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Cdh20Q9Z0M3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cdh20Q9Z0M3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.83■□□□□ 0.77
Cdh20Q9Z0M3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Cdh20Q9Z0M3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Cdh20Q9Z0M3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdh20Q9Z0M3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cdh20Q9Z0M3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh20Q9Z0M3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.82■□□□□ 0.76
Cdh20Q9Z0M3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.82■□□□□ 0.76
Cdh20Q9Z0M3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh20Q9Z0M3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh20Q9Z0M3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh20Q9Z0M3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh20Q9Z0M3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh20Q9Z0M3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cdh20Q9Z0M3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh20Q9Z0M3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh20Q9Z0M3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh20Q9Z0M3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh20Q9Z0M3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh20Q9Z0M3 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.81■□□□□ 0.76
Cdh20Q9Z0M3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.81■□□□□ 0.76
Cdh20Q9Z0M3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh20Q9Z0M3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh20Q9Z0M3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh20Q9Z0M3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cdh20Q9Z0M3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh20Q9Z0M3 Gm10420-201ENSMUST00000121713 882 ntBASIC19.8■□□□□ 0.76
Cdh20Q9Z0M3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh20Q9Z0M3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh20Q9Z0M3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh20Q9Z0M3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh20Q9Z0M3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh20Q9Z0M3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.79■□□□□ 0.76
Cdh20Q9Z0M3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh20Q9Z0M3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.79■□□□□ 0.76
Cdh20Q9Z0M3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.79■□□□□ 0.76
Cdh20Q9Z0M3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.79■□□□□ 0.76
Cdh20Q9Z0M3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.79■□□□□ 0.76
Cdh20Q9Z0M3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.79■□□□□ 0.76
Cdh20Q9Z0M3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Cdh20Q9Z0M3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cdh20Q9Z0M3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh20Q9Z0M3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh20Q9Z0M3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Cdh20Q9Z0M3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh20Q9Z0M3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh20Q9Z0M3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cdh20Q9Z0M3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.78■□□□□ 0.76
Cdh20Q9Z0M3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh20Q9Z0M3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh20Q9Z0M3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh20Q9Z0M3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh20Q9Z0M3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cdh20Q9Z0M3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh20Q9Z0M3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Cdh20Q9Z0M3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh20Q9Z0M3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh20Q9Z0M3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cdh20Q9Z0M3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh20Q9Z0M3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Cdh20Q9Z0M3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.76■□□□□ 0.75
Cdh20Q9Z0M3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh20Q9Z0M3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh20Q9Z0M3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh20Q9Z0M3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.74■□□□□ 0.75
Cdh20Q9Z0M3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh20Q9Z0M3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh20Q9Z0M3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh20Q9Z0M3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.74■□□□□ 0.75
Cdh20Q9Z0M3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.74■□□□□ 0.75
Cdh20Q9Z0M3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh20Q9Z0M3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh20Q9Z0M3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh20Q9Z0M3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh20Q9Z0M3 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.74■□□□□ 0.75
Cdh20Q9Z0M3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
Cdh20Q9Z0M3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh20Q9Z0M3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cdh20Q9Z0M3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh20Q9Z0M3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh20Q9Z0M3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh20Q9Z0M3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh20Q9Z0M3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh20Q9Z0M3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.73■□□□□ 0.75
Cdh20Q9Z0M3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Cdh20Q9Z0M3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms