Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Herpud1Q9JJK5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Herpud1Q9JJK5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Herpud1Q9JJK5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Herpud1Q9JJK5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Herpud1Q9JJK5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Herpud1Q9JJK5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Herpud1Q9JJK5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Herpud1Q9JJK5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Herpud1Q9JJK5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Herpud1Q9JJK5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Herpud1Q9JJK5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Herpud1Q9JJK5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Herpud1Q9JJK5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Herpud1Q9JJK5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Herpud1Q9JJK5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Herpud1Q9JJK5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.77■□□□□ 0.44
Herpud1Q9JJK5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Herpud1Q9JJK5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.77■□□□□ 0.44
Herpud1Q9JJK5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Herpud1Q9JJK5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Herpud1Q9JJK5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.77■□□□□ 0.43
Herpud1Q9JJK5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Herpud1Q9JJK5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Herpud1Q9JJK5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Herpud1Q9JJK5 Gm11687-201ENSMUST00000118911 886 ntBASIC17.76■□□□□ 0.43
Herpud1Q9JJK5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Herpud1Q9JJK5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Herpud1Q9JJK5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Herpud1Q9JJK5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Herpud1Q9JJK5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Herpud1Q9JJK5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Herpud1Q9JJK5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Herpud1Q9JJK5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Herpud1Q9JJK5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Herpud1Q9JJK5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Herpud1Q9JJK5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Herpud1Q9JJK5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Herpud1Q9JJK5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Herpud1Q9JJK5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Herpud1Q9JJK5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Herpud1Q9JJK5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.74■□□□□ 0.43
Herpud1Q9JJK5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Herpud1Q9JJK5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Herpud1Q9JJK5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Herpud1Q9JJK5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Herpud1Q9JJK5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.74■□□□□ 0.43
Herpud1Q9JJK5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Herpud1Q9JJK5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.74■□□□□ 0.43
Herpud1Q9JJK5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Herpud1Q9JJK5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Herpud1Q9JJK5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Herpud1Q9JJK5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Herpud1Q9JJK5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Herpud1Q9JJK5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Herpud1Q9JJK5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Herpud1Q9JJK5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Herpud1Q9JJK5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
Herpud1Q9JJK5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Herpud1Q9JJK5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Herpud1Q9JJK5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.72■□□□□ 0.43
Herpud1Q9JJK5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Herpud1Q9JJK5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Herpud1Q9JJK5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Herpud1Q9JJK5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Herpud1Q9JJK5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.72■□□□□ 0.43
Herpud1Q9JJK5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.71■□□□□ 0.43
Herpud1Q9JJK5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.71■□□□□ 0.43
Herpud1Q9JJK5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Herpud1Q9JJK5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.71■□□□□ 0.43
Herpud1Q9JJK5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Herpud1Q9JJK5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Herpud1Q9JJK5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Herpud1Q9JJK5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Herpud1Q9JJK5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
Herpud1Q9JJK5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Herpud1Q9JJK5 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Herpud1Q9JJK5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.71■□□□□ 0.43
Herpud1Q9JJK5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Herpud1Q9JJK5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Herpud1Q9JJK5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Herpud1Q9JJK5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
Herpud1Q9JJK5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Herpud1Q9JJK5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.7■□□□□ 0.42
Herpud1Q9JJK5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Herpud1Q9JJK5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Herpud1Q9JJK5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Herpud1Q9JJK5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Herpud1Q9JJK5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Herpud1Q9JJK5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Herpud1Q9JJK5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Herpud1Q9JJK5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Herpud1Q9JJK5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Herpud1Q9JJK5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Herpud1Q9JJK5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Herpud1Q9JJK5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Herpud1Q9JJK5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Herpud1Q9JJK5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Herpud1Q9JJK5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Herpud1Q9JJK5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms