Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rhox4bQ9JI43 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rhox4bQ9JI43 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rhox4bQ9JI43 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rhox4bQ9JI43 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.16■□□□□ 0.34
Rhox4bQ9JI43 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.15■□□□□ 0.34
Rhox4bQ9JI43 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rhox4bQ9JI43 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rhox4bQ9JI43 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.15■□□□□ 0.34
Rhox4bQ9JI43 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rhox4bQ9JI43 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rhox4bQ9JI43 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rhox4bQ9JI43 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rhox4bQ9JI43 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rhox4bQ9JI43 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rhox4bQ9JI43 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rhox4bQ9JI43 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rhox4bQ9JI43 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rhox4bQ9JI43 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rhox4bQ9JI43 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rhox4bQ9JI43 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rhox4bQ9JI43 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rhox4bQ9JI43 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rhox4bQ9JI43 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.13■□□□□ 0.33
Rhox4bQ9JI43 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rhox4bQ9JI43 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rhox4bQ9JI43 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rhox4bQ9JI43 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rhox4bQ9JI43 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rhox4bQ9JI43 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhox4bQ9JI43 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rhox4bQ9JI43 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.12■□□□□ 0.33
Rhox4bQ9JI43 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.12■□□□□ 0.33
Rhox4bQ9JI43 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rhox4bQ9JI43 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhox4bQ9JI43 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rhox4bQ9JI43 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhox4bQ9JI43 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhox4bQ9JI43 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhox4bQ9JI43 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rhox4bQ9JI43 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhox4bQ9JI43 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhox4bQ9JI43 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhox4bQ9JI43 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rhox4bQ9JI43 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rhox4bQ9JI43 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rhox4bQ9JI43 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rhox4bQ9JI43 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhox4bQ9JI43 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.1■□□□□ 0.33
Rhox4bQ9JI43 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhox4bQ9JI43 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhox4bQ9JI43 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhox4bQ9JI43 Gm45855-201ENSMUST00000212546 880 ntBASIC17.1■□□□□ 0.33
Rhox4bQ9JI43 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rhox4bQ9JI43 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.09■□□□□ 0.33
Rhox4bQ9JI43 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rhox4bQ9JI43 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rhox4bQ9JI43 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rhox4bQ9JI43 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rhox4bQ9JI43 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Rhox4bQ9JI43 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rhox4bQ9JI43 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rhox4bQ9JI43 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rhox4bQ9JI43 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rhox4bQ9JI43 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rhox4bQ9JI43 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.08■□□□□ 0.32
Rhox4bQ9JI43 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rhox4bQ9JI43 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rhox4bQ9JI43 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rhox4bQ9JI43 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rhox4bQ9JI43 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.07■□□□□ 0.32
Rhox4bQ9JI43 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rhox4bQ9JI43 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rhox4bQ9JI43 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rhox4bQ9JI43 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rhox4bQ9JI43 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rhox4bQ9JI43 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Rhox4bQ9JI43 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.07■□□□□ 0.32
Rhox4bQ9JI43 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rhox4bQ9JI43 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.07■□□□□ 0.32
Rhox4bQ9JI43 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rhox4bQ9JI43 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rhox4bQ9JI43 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rhox4bQ9JI43 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rhox4bQ9JI43 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.06■□□□□ 0.32
Rhox4bQ9JI43 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.06■□□□□ 0.32
Rhox4bQ9JI43 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rhox4bQ9JI43 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rhox4bQ9JI43 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rhox4bQ9JI43 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rhox4bQ9JI43 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rhox4bQ9JI43 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Rhox4bQ9JI43 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rhox4bQ9JI43 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.06■□□□□ 0.32
Rhox4bQ9JI43 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rhox4bQ9JI43 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rhox4bQ9JI43 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rhox4bQ9JI43 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rhox4bQ9JI43 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rhox4bQ9JI43 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms