Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mbd3l1Q9D9H3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mbd3l1Q9D9H3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mbd3l1Q9D9H3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mbd3l1Q9D9H3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mbd3l1Q9D9H3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mbd3l1Q9D9H3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Mbd3l1Q9D9H3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mbd3l1Q9D9H3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Mbd3l1Q9D9H3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mbd3l1Q9D9H3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mbd3l1Q9D9H3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Mbd3l1Q9D9H3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mbd3l1Q9D9H3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mbd3l1Q9D9H3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mbd3l1Q9D9H3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mbd3l1Q9D9H3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mbd3l1Q9D9H3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.61■□□□□ 0.57
Mbd3l1Q9D9H3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Mbd3l1Q9D9H3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mbd3l1Q9D9H3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mbd3l1Q9D9H3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Mbd3l1Q9D9H3 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.6■□□□□ 0.57
Mbd3l1Q9D9H3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mbd3l1Q9D9H3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mbd3l1Q9D9H3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mbd3l1Q9D9H3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Mbd3l1Q9D9H3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Mbd3l1Q9D9H3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mbd3l1Q9D9H3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mbd3l1Q9D9H3 Golph3-202ENSMUST00000226517 2359 ntBASIC18.6■□□□□ 0.57
Mbd3l1Q9D9H3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mbd3l1Q9D9H3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mbd3l1Q9D9H3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mbd3l1Q9D9H3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mbd3l1Q9D9H3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mbd3l1Q9D9H3 Gm27322-201ENSMUST00000184007 104 ntBASIC18.58■□□□□ 0.56
Mbd3l1Q9D9H3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mbd3l1Q9D9H3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Mbd3l1Q9D9H3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mbd3l1Q9D9H3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mbd3l1Q9D9H3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mbd3l1Q9D9H3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mbd3l1Q9D9H3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mbd3l1Q9D9H3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mbd3l1Q9D9H3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mbd3l1Q9D9H3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mbd3l1Q9D9H3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mbd3l1Q9D9H3 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.57■□□□□ 0.56
Mbd3l1Q9D9H3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Mbd3l1Q9D9H3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mbd3l1Q9D9H3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mbd3l1Q9D9H3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mbd3l1Q9D9H3 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.56■□□□□ 0.56
Mbd3l1Q9D9H3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Mbd3l1Q9D9H3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Mbd3l1Q9D9H3 Gm22567-201ENSMUST00000175542 342 ntBASIC18.56■□□□□ 0.56
Mbd3l1Q9D9H3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mbd3l1Q9D9H3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mbd3l1Q9D9H3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mbd3l1Q9D9H3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Mbd3l1Q9D9H3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mbd3l1Q9D9H3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mbd3l1Q9D9H3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mbd3l1Q9D9H3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Mbd3l1Q9D9H3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mbd3l1Q9D9H3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mbd3l1Q9D9H3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mbd3l1Q9D9H3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mbd3l1Q9D9H3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mbd3l1Q9D9H3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mbd3l1Q9D9H3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Mbd3l1Q9D9H3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
Mbd3l1Q9D9H3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Mbd3l1Q9D9H3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.54■□□□□ 0.56
Mbd3l1Q9D9H3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mbd3l1Q9D9H3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mbd3l1Q9D9H3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mbd3l1Q9D9H3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mbd3l1Q9D9H3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mbd3l1Q9D9H3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
Mbd3l1Q9D9H3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mbd3l1Q9D9H3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mbd3l1Q9D9H3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Mbd3l1Q9D9H3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mbd3l1Q9D9H3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mbd3l1Q9D9H3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Mbd3l1Q9D9H3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mbd3l1Q9D9H3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mbd3l1Q9D9H3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mbd3l1Q9D9H3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mbd3l1Q9D9H3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mbd3l1Q9D9H3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Mbd3l1Q9D9H3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.49■□□□□ 0.55
Mbd3l1Q9D9H3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Mbd3l1Q9D9H3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mbd3l1Q9D9H3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Mbd3l1Q9D9H3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mbd3l1Q9D9H3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mbd3l1Q9D9H3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms