Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Tmem54Q9D7S1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tmem54Q9D7S1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Tmem54Q9D7S1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tmem54Q9D7S1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tmem54Q9D7S1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tmem54Q9D7S1 Gm13238-201ENSMUST00000117655 780 ntBASIC18.85■□□□□ 0.61
Tmem54Q9D7S1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tmem54Q9D7S1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tmem54Q9D7S1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tmem54Q9D7S1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.84■□□□□ 0.61
Tmem54Q9D7S1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tmem54Q9D7S1 Gm43566-201ENSMUST00000196851 808 ntBASIC18.84■□□□□ 0.61
Tmem54Q9D7S1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.84■□□□□ 0.61
Tmem54Q9D7S1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Tmem54Q9D7S1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Tmem54Q9D7S1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmem54Q9D7S1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Tmem54Q9D7S1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmem54Q9D7S1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tmem54Q9D7S1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmem54Q9D7S1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmem54Q9D7S1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Tmem54Q9D7S1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem54Q9D7S1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem54Q9D7S1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem54Q9D7S1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem54Q9D7S1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmem54Q9D7S1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Tmem54Q9D7S1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmem54Q9D7S1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tmem54Q9D7S1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.81■□□□□ 0.6
Tmem54Q9D7S1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmem54Q9D7S1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmem54Q9D7S1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmem54Q9D7S1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.81■□□□□ 0.6
Tmem54Q9D7S1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem54Q9D7S1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem54Q9D7S1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.8■□□□□ 0.6
Tmem54Q9D7S1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem54Q9D7S1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tmem54Q9D7S1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem54Q9D7S1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem54Q9D7S1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.8■□□□□ 0.6
Tmem54Q9D7S1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem54Q9D7S1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem54Q9D7S1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem54Q9D7S1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmem54Q9D7S1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.79■□□□□ 0.6
Tmem54Q9D7S1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tmem54Q9D7S1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tmem54Q9D7S1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Tmem54Q9D7S1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmem54Q9D7S1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmem54Q9D7S1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tmem54Q9D7S1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tmem54Q9D7S1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tmem54Q9D7S1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Tmem54Q9D7S1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.77■□□□□ 0.6
Tmem54Q9D7S1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tmem54Q9D7S1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmem54Q9D7S1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmem54Q9D7S1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.76■□□□□ 0.59
Tmem54Q9D7S1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tmem54Q9D7S1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
Tmem54Q9D7S1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tmem54Q9D7S1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.75■□□□□ 0.59
Tmem54Q9D7S1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Tmem54Q9D7S1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.75■□□□□ 0.59
Tmem54Q9D7S1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tmem54Q9D7S1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Tmem54Q9D7S1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tmem54Q9D7S1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Tmem54Q9D7S1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmem54Q9D7S1 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.74■□□□□ 0.59
Tmem54Q9D7S1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmem54Q9D7S1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.73■□□□□ 0.59
Tmem54Q9D7S1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem54Q9D7S1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem54Q9D7S1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem54Q9D7S1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem54Q9D7S1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem54Q9D7S1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem54Q9D7S1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Tmem54Q9D7S1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmem54Q9D7S1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem54Q9D7S1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem54Q9D7S1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem54Q9D7S1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.72■□□□□ 0.59
Tmem54Q9D7S1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem54Q9D7S1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Tmem54Q9D7S1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.72■□□□□ 0.59
Tmem54Q9D7S1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.72■□□□□ 0.59
Tmem54Q9D7S1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem54Q9D7S1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Tmem54Q9D7S1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmem54Q9D7S1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmem54Q9D7S1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmem54Q9D7S1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmem54Q9D7S1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms