Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.34■■□□□ 1.33
Sgms1Q8VCQ6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sgms1Q8VCQ6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Sgms1Q8VCQ6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Sgms1Q8VCQ6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Sgms1Q8VCQ6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sgms1Q8VCQ6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Sgms1Q8VCQ6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sgms1Q8VCQ6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sgms1Q8VCQ6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sgms1Q8VCQ6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Sgms1Q8VCQ6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sgms1Q8VCQ6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
Sgms1Q8VCQ6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sgms1Q8VCQ6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sgms1Q8VCQ6 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.32■■□□□ 1.32
Sgms1Q8VCQ6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.32■■□□□ 1.32
Sgms1Q8VCQ6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sgms1Q8VCQ6 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.31■■□□□ 1.32
Sgms1Q8VCQ6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sgms1Q8VCQ6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sgms1Q8VCQ6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sgms1Q8VCQ6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sgms1Q8VCQ6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sgms1Q8VCQ6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sgms1Q8VCQ6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.3■■□□□ 1.32
Sgms1Q8VCQ6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.3■■□□□ 1.32
Sgms1Q8VCQ6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.3■■□□□ 1.32
Sgms1Q8VCQ6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Sgms1Q8VCQ6 Gm42418-201ENSMUST00000182010 1831 ntBASIC23.3■■□□□ 1.32
Sgms1Q8VCQ6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Sgms1Q8VCQ6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sgms1Q8VCQ6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sgms1Q8VCQ6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.29■■□□□ 1.32
Sgms1Q8VCQ6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sgms1Q8VCQ6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Sgms1Q8VCQ6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sgms1Q8VCQ6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sgms1Q8VCQ6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sgms1Q8VCQ6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sgms1Q8VCQ6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.28■■□□□ 1.32
Sgms1Q8VCQ6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.28■■□□□ 1.32
Sgms1Q8VCQ6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sgms1Q8VCQ6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.27■■□□□ 1.32
Sgms1Q8VCQ6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Sgms1Q8VCQ6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sgms1Q8VCQ6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sgms1Q8VCQ6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.26■■□□□ 1.31
Sgms1Q8VCQ6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sgms1Q8VCQ6 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.26■■□□□ 1.31
Sgms1Q8VCQ6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.26■■□□□ 1.31
Sgms1Q8VCQ6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sgms1Q8VCQ6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sgms1Q8VCQ6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Sgms1Q8VCQ6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.25■■□□□ 1.31
Sgms1Q8VCQ6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.25■■□□□ 1.31
Sgms1Q8VCQ6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sgms1Q8VCQ6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sgms1Q8VCQ6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sgms1Q8VCQ6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
Sgms1Q8VCQ6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sgms1Q8VCQ6 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.25■■□□□ 1.31
Sgms1Q8VCQ6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sgms1Q8VCQ6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sgms1Q8VCQ6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sgms1Q8VCQ6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Sgms1Q8VCQ6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.24■■□□□ 1.31
Sgms1Q8VCQ6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sgms1Q8VCQ6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Sgms1Q8VCQ6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Sgms1Q8VCQ6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sgms1Q8VCQ6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sgms1Q8VCQ6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sgms1Q8VCQ6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sgms1Q8VCQ6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.21■■□□□ 1.31
Sgms1Q8VCQ6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sgms1Q8VCQ6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Sgms1Q8VCQ6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Sgms1Q8VCQ6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Sgms1Q8VCQ6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sgms1Q8VCQ6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sgms1Q8VCQ6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sgms1Q8VCQ6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Sgms1Q8VCQ6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
Sgms1Q8VCQ6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.2■■□□□ 1.3
Sgms1Q8VCQ6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sgms1Q8VCQ6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Sgms1Q8VCQ6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Sgms1Q8VCQ6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sgms1Q8VCQ6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.19■■□□□ 1.3
Sgms1Q8VCQ6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Sgms1Q8VCQ6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC23.19■■□□□ 1.3
Sgms1Q8VCQ6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.19■■□□□ 1.3
Sgms1Q8VCQ6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Sgms1Q8VCQ6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Sgms1Q8VCQ6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.18■■□□□ 1.3
Sgms1Q8VCQ6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sgms1Q8VCQ6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Sgms1Q8VCQ6 Gm10420-201ENSMUST00000121713 882 ntBASIC23.18■■□□□ 1.3
Sgms1Q8VCQ6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms