Protein–RNA interactions for Protein: Q62471

Lcn3, Vomeronasal secretory protein 1, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcn3Q62471 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lcn3Q62471 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lcn3Q62471 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lcn3Q62471 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lcn3Q62471 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lcn3Q62471 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lcn3Q62471 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lcn3Q62471 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Lcn3Q62471 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lcn3Q62471 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lcn3Q62471 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lcn3Q62471 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcn3Q62471 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcn3Q62471 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Lcn3Q62471 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcn3Q62471 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.43■□□□□ 0.54
Lcn3Q62471 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.43■□□□□ 0.54
Lcn3Q62471 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lcn3Q62471 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcn3Q62471 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.43■□□□□ 0.54
Lcn3Q62471 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lcn3Q62471 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.42■□□□□ 0.54
Lcn3Q62471 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Lcn3Q62471 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lcn3Q62471 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lcn3Q62471 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lcn3Q62471 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lcn3Q62471 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lcn3Q62471 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.42■□□□□ 0.54
Lcn3Q62471 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Lcn3Q62471 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lcn3Q62471 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lcn3Q62471 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lcn3Q62471 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.41■□□□□ 0.54
Lcn3Q62471 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.41■□□□□ 0.54
Lcn3Q62471 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lcn3Q62471 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.41■□□□□ 0.54
Lcn3Q62471 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.41■□□□□ 0.54
Lcn3Q62471 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcn3Q62471 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Lcn3Q62471 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcn3Q62471 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcn3Q62471 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcn3Q62471 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcn3Q62471 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Lcn3Q62471 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lcn3Q62471 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.39■□□□□ 0.54
Lcn3Q62471 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lcn3Q62471 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.39■□□□□ 0.53
Lcn3Q62471 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lcn3Q62471 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.39■□□□□ 0.53
Lcn3Q62471 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lcn3Q62471 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lcn3Q62471 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lcn3Q62471 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lcn3Q62471 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lcn3Q62471 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
Lcn3Q62471 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lcn3Q62471 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Lcn3Q62471 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Lcn3Q62471 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lcn3Q62471 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lcn3Q62471 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lcn3Q62471 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lcn3Q62471 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lcn3Q62471 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Lcn3Q62471 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lcn3Q62471 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Lcn3Q62471 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.38■□□□□ 0.53
Lcn3Q62471 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lcn3Q62471 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lcn3Q62471 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lcn3Q62471 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lcn3Q62471 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lcn3Q62471 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.37■□□□□ 0.53
Lcn3Q62471 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.36■□□□□ 0.53
Lcn3Q62471 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lcn3Q62471 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lcn3Q62471 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lcn3Q62471 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Lcn3Q62471 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lcn3Q62471 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lcn3Q62471 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lcn3Q62471 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lcn3Q62471 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.34■□□□□ 0.53
Lcn3Q62471 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Lcn3Q62471 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcn3Q62471 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcn3Q62471 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcn3Q62471 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcn3Q62471 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.34■□□□□ 0.53
Lcn3Q62471 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcn3Q62471 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcn3Q62471 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Lcn3Q62471 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.34■□□□□ 0.53
Lcn3Q62471 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcn3Q62471 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.33■□□□□ 0.53
Lcn3Q62471 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lcn3Q62471 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lcn3Q62471 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms