Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.31■□□□□ 0.68
Cldn18P56857 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Cldn18P56857 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn18P56857 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cldn18P56857 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.31■□□□□ 0.68
Cldn18P56857 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn18P56857 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn18P56857 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cldn18P56857 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn18P56857 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn18P56857 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn18P56857 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn18P56857 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn18P56857 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cldn18P56857 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cldn18P56857 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn18P56857 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn18P56857 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn18P56857 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn18P56857 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn18P56857 Gm43566-201ENSMUST00000196851 808 ntBASIC19.28■□□□□ 0.68
Cldn18P56857 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cldn18P56857 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Cldn18P56857 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn18P56857 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.27■□□□□ 0.68
Cldn18P56857 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn18P56857 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.27■□□□□ 0.68
Cldn18P56857 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.26■□□□□ 0.67
Cldn18P56857 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn18P56857 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.26■□□□□ 0.67
Cldn18P56857 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn18P56857 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn18P56857 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cldn18P56857 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn18P56857 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn18P56857 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn18P56857 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.26■□□□□ 0.67
Cldn18P56857 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn18P56857 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.25■□□□□ 0.67
Cldn18P56857 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cldn18P56857 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.25■□□□□ 0.67
Cldn18P56857 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn18P56857 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn18P56857 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn18P56857 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cldn18P56857 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.24■□□□□ 0.67
Cldn18P56857 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn18P56857 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn18P56857 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cldn18P56857 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn18P56857 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cldn18P56857 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.23■□□□□ 0.67
Cldn18P56857 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.23■□□□□ 0.67
Cldn18P56857 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn18P56857 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn18P56857 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn18P56857 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn18P56857 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn18P56857 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn18P56857 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.23■□□□□ 0.67
Cldn18P56857 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn18P56857 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn18P56857 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn18P56857 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Cldn18P56857 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn18P56857 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn18P56857 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn18P56857 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn18P56857 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cldn18P56857 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn18P56857 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn18P56857 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn18P56857 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cldn18P56857 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn18P56857 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn18P56857 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn18P56857 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn18P56857 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cldn18P56857 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn18P56857 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Cldn18P56857 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn18P56857 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn18P56857 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn18P56857 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn18P56857 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn18P56857 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.19■□□□□ 0.66
Cldn18P56857 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn18P56857 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn18P56857 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn18P56857 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn18P56857 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.18■□□□□ 0.66
Cldn18P56857 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn18P56857 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.18■□□□□ 0.66
Cldn18P56857 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.18■□□□□ 0.66
Cldn18P56857 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn18P56857 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn18P56857 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn18P56857 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn18P56857 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.17■□□□□ 0.66
Cldn18P56857 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 219.1 ms