Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Gm12366-201ENSMUST00000121722 873 ntBASIC19.23■□□□□ 0.67
Abcd3P55096 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.23■□□□□ 0.67
Abcd3P55096 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Abcd3P55096 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcd3P55096 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.23■□□□□ 0.67
Abcd3P55096 Gm5786-201ENSMUST00000085368 882 ntBASIC19.23■□□□□ 0.67
Abcd3P55096 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcd3P55096 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcd3P55096 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Abcd3P55096 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Abcd3P55096 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Abcd3P55096 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Abcd3P55096 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Abcd3P55096 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Abcd3P55096 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcd3P55096 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcd3P55096 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.21■□□□□ 0.67
Abcd3P55096 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcd3P55096 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcd3P55096 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Abcd3P55096 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcd3P55096 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.2■□□□□ 0.66
Abcd3P55096 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcd3P55096 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcd3P55096 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcd3P55096 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcd3P55096 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Abcd3P55096 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Abcd3P55096 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcd3P55096 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Abcd3P55096 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Abcd3P55096 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcd3P55096 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcd3P55096 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Abcd3P55096 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Abcd3P55096 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Abcd3P55096 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Abcd3P55096 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abcd3P55096 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.18■□□□□ 0.66
Abcd3P55096 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.18■□□□□ 0.66
Abcd3P55096 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abcd3P55096 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abcd3P55096 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Abcd3P55096 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Abcd3P55096 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcd3P55096 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Abcd3P55096 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcd3P55096 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcd3P55096 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcd3P55096 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.17■□□□□ 0.66
Abcd3P55096 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Abcd3P55096 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Abcd3P55096 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abcd3P55096 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abcd3P55096 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Abcd3P55096 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.16■□□□□ 0.66
Abcd3P55096 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abcd3P55096 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abcd3P55096 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Abcd3P55096 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Abcd3P55096 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Abcd3P55096 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Abcd3P55096 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.15■□□□□ 0.66
Abcd3P55096 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.15■□□□□ 0.66
Abcd3P55096 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Abcd3P55096 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Abcd3P55096 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.15■□□□□ 0.66
Abcd3P55096 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.15■□□□□ 0.66
Abcd3P55096 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Abcd3P55096 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abcd3P55096 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.14■□□□□ 0.65
Abcd3P55096 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.14■□□□□ 0.65
Abcd3P55096 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Abcd3P55096 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Abcd3P55096 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Abcd3P55096 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.13■□□□□ 0.65
Abcd3P55096 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcd3P55096 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcd3P55096 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcd3P55096 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.13■□□□□ 0.65
Abcd3P55096 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcd3P55096 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcd3P55096 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Abcd3P55096 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcd3P55096 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.12■□□□□ 0.65
Abcd3P55096 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcd3P55096 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.12■□□□□ 0.65
Abcd3P55096 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcd3P55096 Gm10420-201ENSMUST00000121713 882 ntBASIC19.12■□□□□ 0.65
Abcd3P55096 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Abcd3P55096 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.12■□□□□ 0.65
Abcd3P55096 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Abcd3P55096 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcd3P55096 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Abcd3P55096 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.11■□□□□ 0.65
Abcd3P55096 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abcd3P55096 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Abcd3P55096 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Abcd3P55096 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Abcd3P55096 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms