Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CfdP03953 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.93■□□□□ 0.46
CfdP03953 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.93■□□□□ 0.46
CfdP03953 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CfdP03953 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CfdP03953 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CfdP03953 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CfdP03953 Gm9812-201ENSMUST00000061934 968 ntBASIC17.92■□□□□ 0.46
CfdP03953 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CfdP03953 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CfdP03953 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CfdP03953 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CfdP03953 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.92■□□□□ 0.46
CfdP03953 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CfdP03953 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CfdP03953 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CfdP03953 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CfdP03953 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CfdP03953 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CfdP03953 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CfdP03953 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CfdP03953 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CfdP03953 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CfdP03953 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CfdP03953 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CfdP03953 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CfdP03953 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.89■□□□□ 0.46
CfdP03953 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CfdP03953 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.89■□□□□ 0.45
CfdP03953 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CfdP03953 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CfdP03953 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CfdP03953 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CfdP03953 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.89■□□□□ 0.45
CfdP03953 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.88■□□□□ 0.45
CfdP03953 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CfdP03953 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CfdP03953 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CfdP03953 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CfdP03953 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.88■□□□□ 0.45
CfdP03953 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CfdP03953 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CfdP03953 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CfdP03953 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CfdP03953 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CfdP03953 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CfdP03953 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CfdP03953 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CfdP03953 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CfdP03953 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CfdP03953 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CfdP03953 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CfdP03953 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CfdP03953 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CfdP03953 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.86■□□□□ 0.45
CfdP03953 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.86■□□□□ 0.45
CfdP03953 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CfdP03953 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CfdP03953 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.86■□□□□ 0.45
CfdP03953 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CfdP03953 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CfdP03953 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CfdP03953 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CfdP03953 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CfdP03953 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CfdP03953 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.85■□□□□ 0.45
CfdP03953 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CfdP03953 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CfdP03953 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CfdP03953 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CfdP03953 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CfdP03953 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CfdP03953 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.84■□□□□ 0.45
CfdP03953 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CfdP03953 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CfdP03953 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CfdP03953 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CfdP03953 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CfdP03953 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CfdP03953 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CfdP03953 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CfdP03953 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CfdP03953 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CfdP03953 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CfdP03953 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CfdP03953 Gm4799-201ENSMUST00000095396 657 ntBASIC17.83■□□□□ 0.44
CfdP03953 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CfdP03953 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CfdP03953 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CfdP03953 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CfdP03953 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.82■□□□□ 0.44
CfdP03953 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.81■□□□□ 0.44
CfdP03953 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CfdP03953 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CfdP03953 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CfdP03953 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CfdP03953 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CfdP03953 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.81■□□□□ 0.44
CfdP03953 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CfdP03953 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms