Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.05■■□□□ 1.12
Atf6F6VAN0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atf6F6VAN0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Atf6F6VAN0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atf6F6VAN0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Atf6F6VAN0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atf6F6VAN0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atf6F6VAN0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atf6F6VAN0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Atf6F6VAN0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atf6F6VAN0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.04■■□□□ 1.12
Atf6F6VAN0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atf6F6VAN0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Atf6F6VAN0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
Atf6F6VAN0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Atf6F6VAN0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atf6F6VAN0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.03■■□□□ 1.12
Atf6F6VAN0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atf6F6VAN0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Atf6F6VAN0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atf6F6VAN0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atf6F6VAN0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Atf6F6VAN0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atf6F6VAN0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atf6F6VAN0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Atf6F6VAN0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Atf6F6VAN0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Atf6F6VAN0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Atf6F6VAN0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Atf6F6VAN0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atf6F6VAN0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.01■■□□□ 1.11
Atf6F6VAN0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atf6F6VAN0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Atf6F6VAN0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Atf6F6VAN0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22■■□□□ 1.11
Atf6F6VAN0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22■■□□□ 1.11
Atf6F6VAN0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Atf6F6VAN0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Atf6F6VAN0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Atf6F6VAN0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22■■□□□ 1.11
Atf6F6VAN0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Atf6F6VAN0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Atf6F6VAN0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Atf6F6VAN0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Atf6F6VAN0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Atf6F6VAN0 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.98■■□□□ 1.11
Atf6F6VAN0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Atf6F6VAN0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Atf6F6VAN0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Atf6F6VAN0 Gm10420-201ENSMUST00000121713 882 ntBASIC21.98■■□□□ 1.11
Atf6F6VAN0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.98■■□□□ 1.11
Atf6F6VAN0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Atf6F6VAN0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
Atf6F6VAN0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Atf6F6VAN0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.97■■□□□ 1.11
Atf6F6VAN0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Atf6F6VAN0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Atf6F6VAN0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Atf6F6VAN0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.96■■□□□ 1.11
Atf6F6VAN0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
Atf6F6VAN0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Atf6F6VAN0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Atf6F6VAN0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.96■■□□□ 1.11
Atf6F6VAN0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.95■■□□□ 1.1
Atf6F6VAN0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Atf6F6VAN0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atf6F6VAN0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atf6F6VAN0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atf6F6VAN0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
Atf6F6VAN0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Atf6F6VAN0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.94■■□□□ 1.1
Atf6F6VAN0 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.94■■□□□ 1.1
Atf6F6VAN0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Atf6F6VAN0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.94■■□□□ 1.1
Atf6F6VAN0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Atf6F6VAN0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.94■■□□□ 1.1
Atf6F6VAN0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.94■■□□□ 1.1
Atf6F6VAN0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Atf6F6VAN0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Atf6F6VAN0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Atf6F6VAN0 Cap2-205ENSMUST00000225824 1634 ntBASIC21.93■■□□□ 1.1
Atf6F6VAN0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Atf6F6VAN0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Atf6F6VAN0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Atf6F6VAN0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Atf6F6VAN0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Atf6F6VAN0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Atf6F6VAN0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Atf6F6VAN0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.92■■□□□ 1.1
Atf6F6VAN0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Atf6F6VAN0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Atf6F6VAN0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Atf6F6VAN0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.91■■□□□ 1.1
Atf6F6VAN0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.91■■□□□ 1.1
Atf6F6VAN0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Atf6F6VAN0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Atf6F6VAN0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Atf6F6VAN0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Atf6F6VAN0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Atf6F6VAN0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 113.4 ms