Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trbv17A0A140T8P8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv17A0A140T8P8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv17A0A140T8P8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv17A0A140T8P8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv17A0A140T8P8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv17A0A140T8P8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.35■□□□□ 0.21
Trbv17A0A140T8P8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv17A0A140T8P8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.34■□□□□ 0.21
Trbv17A0A140T8P8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trbv17A0A140T8P8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv17A0A140T8P8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv17A0A140T8P8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trbv17A0A140T8P8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv17A0A140T8P8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv17A0A140T8P8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv17A0A140T8P8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trbv17A0A140T8P8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv17A0A140T8P8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv17A0A140T8P8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv17A0A140T8P8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv17A0A140T8P8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv17A0A140T8P8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv17A0A140T8P8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv17A0A140T8P8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv17A0A140T8P8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trbv17A0A140T8P8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv17A0A140T8P8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.32■□□□□ 0.2
Trbv17A0A140T8P8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv17A0A140T8P8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.32■□□□□ 0.2
Trbv17A0A140T8P8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv17A0A140T8P8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv17A0A140T8P8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv17A0A140T8P8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Trbv17A0A140T8P8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv17A0A140T8P8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv17A0A140T8P8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv17A0A140T8P8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv17A0A140T8P8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv17A0A140T8P8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv17A0A140T8P8 Gm10420-201ENSMUST00000121713 882 ntBASIC16.31■□□□□ 0.2
Trbv17A0A140T8P8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv17A0A140T8P8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv17A0A140T8P8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.31■□□□□ 0.2
Trbv17A0A140T8P8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv17A0A140T8P8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv17A0A140T8P8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trbv17A0A140T8P8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv17A0A140T8P8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv17A0A140T8P8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv17A0A140T8P8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trbv17A0A140T8P8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv17A0A140T8P8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv17A0A140T8P8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv17A0A140T8P8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trbv17A0A140T8P8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv17A0A140T8P8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv17A0A140T8P8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Trbv17A0A140T8P8 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.29■□□□□ 0.2
Trbv17A0A140T8P8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv17A0A140T8P8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv17A0A140T8P8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv17A0A140T8P8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.29■□□□□ 0.2
Trbv17A0A140T8P8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv17A0A140T8P8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.28■□□□□ 0.2
Trbv17A0A140T8P8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv17A0A140T8P8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv17A0A140T8P8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.28■□□□□ 0.2
Trbv17A0A140T8P8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.28■□□□□ 0.2
Trbv17A0A140T8P8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv17A0A140T8P8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv17A0A140T8P8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trbv17A0A140T8P8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv17A0A140T8P8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv17A0A140T8P8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv17A0A140T8P8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv17A0A140T8P8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv17A0A140T8P8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv17A0A140T8P8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Trbv17A0A140T8P8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv17A0A140T8P8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv17A0A140T8P8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.27■□□□□ 0.19
Trbv17A0A140T8P8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Trbv17A0A140T8P8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv17A0A140T8P8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.27■□□□□ 0.19
Trbv17A0A140T8P8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv17A0A140T8P8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv17A0A140T8P8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv17A0A140T8P8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trbv17A0A140T8P8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv17A0A140T8P8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trbv17A0A140T8P8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trbv17A0A140T8P8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.25■□□□□ 0.19
Trbv17A0A140T8P8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv17A0A140T8P8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv17A0A140T8P8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.25■□□□□ 0.19
Trbv17A0A140T8P8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv17A0A140T8P8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv17A0A140T8P8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv17A0A140T8P8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms