Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-4A0A0G2JG37 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-4A0A0G2JG37 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav9d-4A0A0G2JG37 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-4A0A0G2JG37 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-4A0A0G2JG37 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-4A0A0G2JG37 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-4A0A0G2JG37 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-4A0A0G2JG37 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.61□□□□□ -0.07
Trav9d-4A0A0G2JG37 Gm28731-201ENSMUST00000185564 1569 ntBASIC14.6□□□□□ -0.07
Trav9d-4A0A0G2JG37 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-4A0A0G2JG37 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-4A0A0G2JG37 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav9d-4A0A0G2JG37 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav9d-4A0A0G2JG37 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-4A0A0G2JG37 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-4A0A0G2JG37 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-4A0A0G2JG37 Gm9910-201ENSMUST00000195385 1550 ntBASIC14.6□□□□□ -0.07
Trav9d-4A0A0G2JG37 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-4A0A0G2JG37 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-4A0A0G2JG37 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-4A0A0G2JG37 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-4A0A0G2JG37 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav9d-4A0A0G2JG37 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav9d-4A0A0G2JG37 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-4A0A0G2JG37 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav9d-4A0A0G2JG37 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-4A0A0G2JG37 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.59□□□□□ -0.07
Trav9d-4A0A0G2JG37 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-4A0A0G2JG37 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9d-4A0A0G2JG37 AC153524.1-201ENSMUST00000220436 1935 ntBASIC14.58□□□□□ -0.07
Trav9d-4A0A0G2JG37 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav9d-4A0A0G2JG37 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-4A0A0G2JG37 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-4A0A0G2JG37 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-4A0A0G2JG37 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9d-4A0A0G2JG37 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-4A0A0G2JG37 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-4A0A0G2JG37 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
Trav9d-4A0A0G2JG37 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-4A0A0G2JG37 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav9d-4A0A0G2JG37 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-4A0A0G2JG37 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-4A0A0G2JG37 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav9d-4A0A0G2JG37 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9d-4A0A0G2JG37 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-4A0A0G2JG37 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Trav9d-4A0A0G2JG37 AC115037.1-201ENSMUST00000223391 2173 ntBASIC14.56□□□□□ -0.08
Trav9d-4A0A0G2JG37 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav9d-4A0A0G2JG37 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9d-4A0A0G2JG37 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav9d-4A0A0G2JG37 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-4A0A0G2JG37 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Trav9d-4A0A0G2JG37 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav9d-4A0A0G2JG37 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-4A0A0G2JG37 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav9d-4A0A0G2JG37 Gm42809-201ENSMUST00000198429 1138 ntBASIC14.55□□□□□ -0.08
Trav9d-4A0A0G2JG37 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-4A0A0G2JG37 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-4A0A0G2JG37 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-4A0A0G2JG37 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-4A0A0G2JG37 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9d-4A0A0G2JG37 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-4A0A0G2JG37 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-4A0A0G2JG37 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-4A0A0G2JG37 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-4A0A0G2JG37 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav9d-4A0A0G2JG37 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9d-4A0A0G2JG37 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9d-4A0A0G2JG37 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9d-4A0A0G2JG37 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trav9d-4A0A0G2JG37 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav9d-4A0A0G2JG37 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav9d-4A0A0G2JG37 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9d-4A0A0G2JG37 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav9d-4A0A0G2JG37 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav9d-4A0A0G2JG37 Notumos-201ENSMUST00000151998 2659 ntBASIC14.51□□□□□ -0.09
Trav9d-4A0A0G2JG37 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-4A0A0G2JG37 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav9d-4A0A0G2JG37 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-4A0A0G2JG37 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-4A0A0G2JG37 Gm9939-201ENSMUST00000067161 1154 ntBASIC14.51□□□□□ -0.09
Trav9d-4A0A0G2JG37 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 132 ms