Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.07■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.07■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.07■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.06■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.05■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Particl-201ENSMUST00000205370 1560 ntBASIC16.04■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tcrg-V4A0A0B4J1J8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.02■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tcrg-V4A0A0B4J1J8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms