Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-4A0A075B6B4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-4A0A075B6B4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-4A0A075B6B4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Trav6-4A0A075B6B4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav6-4A0A075B6B4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-4A0A075B6B4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-4A0A075B6B4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-4A0A075B6B4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-4A0A075B6B4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trav6-4A0A075B6B4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav6-4A0A075B6B4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-4A0A075B6B4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav6-4A0A075B6B4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.49■□□□□ 0.23
Trav6-4A0A075B6B4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav6-4A0A075B6B4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-4A0A075B6B4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-4A0A075B6B4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-4A0A075B6B4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-4A0A075B6B4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-4A0A075B6B4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Trav6-4A0A075B6B4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-4A0A075B6B4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav6-4A0A075B6B4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-4A0A075B6B4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-4A0A075B6B4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-4A0A075B6B4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav6-4A0A075B6B4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-4A0A075B6B4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-4A0A075B6B4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-4A0A075B6B4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-4A0A075B6B4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-4A0A075B6B4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-4A0A075B6B4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-4A0A075B6B4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-4A0A075B6B4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-4A0A075B6B4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-4A0A075B6B4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-4A0A075B6B4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-4A0A075B6B4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-4A0A075B6B4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-4A0A075B6B4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.46■□□□□ 0.23
Trav6-4A0A075B6B4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.46■□□□□ 0.23
Trav6-4A0A075B6B4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-4A0A075B6B4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav6-4A0A075B6B4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav6-4A0A075B6B4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav6-4A0A075B6B4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-4A0A075B6B4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-4A0A075B6B4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-4A0A075B6B4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-4A0A075B6B4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-4A0A075B6B4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-4A0A075B6B4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav6-4A0A075B6B4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-4A0A075B6B4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-4A0A075B6B4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-4A0A075B6B4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-4A0A075B6B4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-4A0A075B6B4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-4A0A075B6B4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-4A0A075B6B4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-4A0A075B6B4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-4A0A075B6B4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav6-4A0A075B6B4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-4A0A075B6B4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-4A0A075B6B4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-4A0A075B6B4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-4A0A075B6B4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav6-4A0A075B6B4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav6-4A0A075B6B4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-4A0A075B6B4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav6-4A0A075B6B4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.43■□□□□ 0.22
Trav6-4A0A075B6B4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-4A0A075B6B4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-4A0A075B6B4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-4A0A075B6B4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav6-4A0A075B6B4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav6-4A0A075B6B4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-4A0A075B6B4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-4A0A075B6B4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav6-4A0A075B6B4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-4A0A075B6B4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-4A0A075B6B4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-4A0A075B6B4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-4A0A075B6B4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav6-4A0A075B6B4 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.42■□□□□ 0.22
Trav6-4A0A075B6B4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav6-4A0A075B6B4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-4A0A075B6B4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-4A0A075B6B4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-4A0A075B6B4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-4A0A075B6B4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-4A0A075B6B4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-4A0A075B6B4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-4A0A075B6B4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-4A0A075B6B4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Trav6-4A0A075B6B4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav6-4A0A075B6B4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-4A0A075B6B4 Gm5921-201ENSMUST00000075898 882 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms