Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx6Q9R1R0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx6Q9R1R0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.06■□□□□ 0.8
Lhx6Q9R1R0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx6Q9R1R0 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx6Q9R1R0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx6Q9R1R0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx6Q9R1R0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx6Q9R1R0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Lhx6Q9R1R0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.06■□□□□ 0.8
Lhx6Q9R1R0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx6Q9R1R0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.05■□□□□ 0.8
Lhx6Q9R1R0 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.05■□□□□ 0.8
Lhx6Q9R1R0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.05■□□□□ 0.8
Lhx6Q9R1R0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Lhx6Q9R1R0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx6Q9R1R0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.04■□□□□ 0.8
Lhx6Q9R1R0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx6Q9R1R0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx6Q9R1R0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx6Q9R1R0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx6Q9R1R0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.03■□□□□ 0.8
Lhx6Q9R1R0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.03■□□□□ 0.8
Lhx6Q9R1R0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx6Q9R1R0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.03■□□□□ 0.8
Lhx6Q9R1R0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx6Q9R1R0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx6Q9R1R0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx6Q9R1R0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lhx6Q9R1R0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Lhx6Q9R1R0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lhx6Q9R1R0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lhx6Q9R1R0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Lhx6Q9R1R0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.02■□□□□ 0.8
Lhx6Q9R1R0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Lhx6Q9R1R0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.02■□□□□ 0.8
Lhx6Q9R1R0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Lhx6Q9R1R0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lhx6Q9R1R0 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.01■□□□□ 0.79
Lhx6Q9R1R0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx6Q9R1R0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.01■□□□□ 0.79
Lhx6Q9R1R0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Lhx6Q9R1R0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.01■□□□□ 0.79
Lhx6Q9R1R0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.01■□□□□ 0.79
Lhx6Q9R1R0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
Lhx6Q9R1R0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.01■□□□□ 0.79
Lhx6Q9R1R0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx6Q9R1R0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx6Q9R1R0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.01■□□□□ 0.79
Lhx6Q9R1R0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx6Q9R1R0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.01■□□□□ 0.79
Lhx6Q9R1R0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lhx6Q9R1R0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Lhx6Q9R1R0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20■□□□□ 0.79
Lhx6Q9R1R0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Lhx6Q9R1R0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lhx6Q9R1R0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lhx6Q9R1R0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Lhx6Q9R1R0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lhx6Q9R1R0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lhx6Q9R1R0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx6Q9R1R0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx6Q9R1R0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Lhx6Q9R1R0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
Lhx6Q9R1R0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx6Q9R1R0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx6Q9R1R0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Lhx6Q9R1R0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Lhx6Q9R1R0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Lhx6Q9R1R0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx6Q9R1R0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx6Q9R1R0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.98■□□□□ 0.79
Lhx6Q9R1R0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Lhx6Q9R1R0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx6Q9R1R0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx6Q9R1R0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx6Q9R1R0 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.97■□□□□ 0.79
Lhx6Q9R1R0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx6Q9R1R0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx6Q9R1R0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Lhx6Q9R1R0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx6Q9R1R0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx6Q9R1R0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx6Q9R1R0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx6Q9R1R0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx6Q9R1R0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.96■□□□□ 0.79
Lhx6Q9R1R0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx6Q9R1R0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.96■□□□□ 0.79
Lhx6Q9R1R0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.96■□□□□ 0.79
Lhx6Q9R1R0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Lhx6Q9R1R0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.96■□□□□ 0.79
Lhx6Q9R1R0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Lhx6Q9R1R0 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.96■□□□□ 0.79
Lhx6Q9R1R0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.96■□□□□ 0.79
Lhx6Q9R1R0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx6Q9R1R0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx6Q9R1R0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx6Q9R1R0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx6Q9R1R0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx6Q9R1R0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms