Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20aQ9DC33 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20aQ9DC33 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20aQ9DC33 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Hmg20aQ9DC33 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20aQ9DC33 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20aQ9DC33 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Hmg20aQ9DC33 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmg20aQ9DC33 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmg20aQ9DC33 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmg20aQ9DC33 Iqck-206ENSMUST00000208658 2891 ntBASIC19.68■□□□□ 0.74
Hmg20aQ9DC33 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmg20aQ9DC33 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hmg20aQ9DC33 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmg20aQ9DC33 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmg20aQ9DC33 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmg20aQ9DC33 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmg20aQ9DC33 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Hmg20aQ9DC33 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmg20aQ9DC33 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Hmg20aQ9DC33 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmg20aQ9DC33 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmg20aQ9DC33 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmg20aQ9DC33 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hmg20aQ9DC33 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmg20aQ9DC33 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hmg20aQ9DC33 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmg20aQ9DC33 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmg20aQ9DC33 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Hmg20aQ9DC33 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Hmg20aQ9DC33 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmg20aQ9DC33 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmg20aQ9DC33 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmg20aQ9DC33 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.65■□□□□ 0.74
Hmg20aQ9DC33 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hmg20aQ9DC33 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmg20aQ9DC33 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.65■□□□□ 0.74
Hmg20aQ9DC33 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.65■□□□□ 0.74
Hmg20aQ9DC33 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hmg20aQ9DC33 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hmg20aQ9DC33 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.64■□□□□ 0.73
Hmg20aQ9DC33 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hmg20aQ9DC33 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hmg20aQ9DC33 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmg20aQ9DC33 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Hmg20aQ9DC33 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmg20aQ9DC33 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hmg20aQ9DC33 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Hmg20aQ9DC33 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.62■□□□□ 0.73
Hmg20aQ9DC33 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmg20aQ9DC33 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmg20aQ9DC33 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmg20aQ9DC33 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Hmg20aQ9DC33 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.6■□□□□ 0.73
Hmg20aQ9DC33 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.6■□□□□ 0.73
Hmg20aQ9DC33 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Hmg20aQ9DC33 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmg20aQ9DC33 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.6■□□□□ 0.73
Hmg20aQ9DC33 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmg20aQ9DC33 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmg20aQ9DC33 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmg20aQ9DC33 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmg20aQ9DC33 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmg20aQ9DC33 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmg20aQ9DC33 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hmg20aQ9DC33 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmg20aQ9DC33 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmg20aQ9DC33 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmg20aQ9DC33 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Hmg20aQ9DC33 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hmg20aQ9DC33 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Hmg20aQ9DC33 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Hmg20aQ9DC33 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hmg20aQ9DC33 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Hmg20aQ9DC33 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmg20aQ9DC33 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmg20aQ9DC33 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmg20aQ9DC33 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmg20aQ9DC33 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmg20aQ9DC33 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmg20aQ9DC33 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmg20aQ9DC33 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmg20aQ9DC33 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmg20aQ9DC33 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmg20aQ9DC33 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Hmg20aQ9DC33 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmg20aQ9DC33 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmg20aQ9DC33 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmg20aQ9DC33 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hmg20aQ9DC33 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmg20aQ9DC33 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmg20aQ9DC33 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmg20aQ9DC33 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmg20aQ9DC33 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmg20aQ9DC33 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.55■□□□□ 0.72
Hmg20aQ9DC33 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmg20aQ9DC33 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmg20aQ9DC33 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmg20aQ9DC33 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.54■□□□□ 0.72
Hmg20aQ9DC33 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms