Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ska1Q9CPV1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ska1Q9CPV1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ska1Q9CPV1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.25■□□□□ 0.83
Ska1Q9CPV1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.24■□□□□ 0.83
Ska1Q9CPV1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ska1Q9CPV1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ska1Q9CPV1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ska1Q9CPV1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Ska1Q9CPV1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.23■□□□□ 0.83
Ska1Q9CPV1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ska1Q9CPV1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.23■□□□□ 0.83
Ska1Q9CPV1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ska1Q9CPV1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Ska1Q9CPV1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ska1Q9CPV1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ska1Q9CPV1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ska1Q9CPV1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ska1Q9CPV1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ska1Q9CPV1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ska1Q9CPV1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ska1Q9CPV1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
Ska1Q9CPV1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ska1Q9CPV1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ska1Q9CPV1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ska1Q9CPV1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ska1Q9CPV1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Ska1Q9CPV1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ska1Q9CPV1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ska1Q9CPV1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ska1Q9CPV1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.21■□□□□ 0.83
Ska1Q9CPV1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.2■□□□□ 0.82
Ska1Q9CPV1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ska1Q9CPV1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.2■□□□□ 0.82
Ska1Q9CPV1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.2■□□□□ 0.82
Ska1Q9CPV1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.2■□□□□ 0.82
Ska1Q9CPV1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ska1Q9CPV1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ska1Q9CPV1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.19■□□□□ 0.82
Ska1Q9CPV1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ska1Q9CPV1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Ska1Q9CPV1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ska1Q9CPV1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.18■□□□□ 0.82
Ska1Q9CPV1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ska1Q9CPV1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ska1Q9CPV1 Gm6311-201ENSMUST00000073790 878 ntBASIC20.18■□□□□ 0.82
Ska1Q9CPV1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ska1Q9CPV1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ska1Q9CPV1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ska1Q9CPV1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.17■□□□□ 0.82
Ska1Q9CPV1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ska1Q9CPV1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.17■□□□□ 0.82
Ska1Q9CPV1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ska1Q9CPV1 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.17■□□□□ 0.82
Ska1Q9CPV1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ska1Q9CPV1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.16■□□□□ 0.82
Ska1Q9CPV1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ska1Q9CPV1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.16■□□□□ 0.82
Ska1Q9CPV1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ska1Q9CPV1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ska1Q9CPV1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ska1Q9CPV1 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.16■□□□□ 0.82
Ska1Q9CPV1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ska1Q9CPV1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Ska1Q9CPV1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ska1Q9CPV1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ska1Q9CPV1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ska1Q9CPV1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ska1Q9CPV1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ska1Q9CPV1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ska1Q9CPV1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ska1Q9CPV1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ska1Q9CPV1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ska1Q9CPV1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ska1Q9CPV1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Ska1Q9CPV1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ska1Q9CPV1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ska1Q9CPV1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.14■□□□□ 0.81
Ska1Q9CPV1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Ska1Q9CPV1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ska1Q9CPV1 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.14■□□□□ 0.81
Ska1Q9CPV1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Ska1Q9CPV1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ska1Q9CPV1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ska1Q9CPV1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ska1Q9CPV1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ska1Q9CPV1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ska1Q9CPV1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ska1Q9CPV1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ska1Q9CPV1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ska1Q9CPV1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ska1Q9CPV1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ska1Q9CPV1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ska1Q9CPV1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.12■□□□□ 0.81
Ska1Q9CPV1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ska1Q9CPV1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ska1Q9CPV1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ska1Q9CPV1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ska1Q9CPV1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ska1Q9CPV1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms